RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 EPHA1P21709 976 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 KIR2DS2P43631 304 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 RAB14P61106 215 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 SLC25A48Q6ZT89 311 aaKnown RBP11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 DMBX1Q8NFW5 382 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 LEAP2Q969E1 77 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 ADTRPQ96IZ2 230 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 COA4Q9NYJ1 87 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 A0A1W2PPH5 198 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 RBFOX2O43251 390 aaKnown RBP eCLIP11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 PPIHO43447 177 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 GPR137BO60478 399 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 HPRT1P00492 218 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 TPT1P13693 172 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 GNG10P50151 68 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 TMEM33P57088 247 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 BRWD1-AS2P59051 145 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 POLR2GP62487 172 aaKnown RBP eCLIP11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 VAMP2P63027 116 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 ZNF816Q0VGE8 651 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 OR2B11Q5JQS5 317 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 CXorf66Q5JRM2 361 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 AVPI1Q5T686 147 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 SLC7A5P1Q8MH63 180 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 LYG1Q8N1E2 194 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 STOML3Q8TAV4 291 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 PHYHIPLQ96FC7 376 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 NEIL1Q96FI4 390 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 OR8B2Q96RD0 313 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 S1PR3Q99500 378 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
POLR2J3-204ENST00000486319 SAA2-SAA4A0A096LPE2 208 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 A0A1W2PPE3 182 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 FAM90A26D6RGX4 464 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 S1PR2O95136 353 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 SAA2P0DJI9 122 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 USF1P22415 310 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 THBS3P49746 956 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 RIPPLY3P57055 190 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 EIF5AP63241 154 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 LOXL1Q08397 574 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 RPL39P5Q59GN2 51 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 CLLU1Q5K131 121 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 NCR3LG1Q68D85 454 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 ALKAL2Q6UX46 152 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 C8orf31Q8N9H6 132 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 C11orf1Q9H5F2 150 aa11.94□□□□□ -0.5
POLR2J3-204ENST00000486319 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 A0A096LNT2 108 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 SSSCA1O60232 199 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 FCGR3BO75015 233 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 KRASP01116 189 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 G6PCP35575 357 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 DLX6P56179 175 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 UTF1Q5T230 341 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 Q6ZRM9 215 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 OR2C3Q8N628 320 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 CYTL1Q9NRR1 136 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 ZANQ9Y493 2812 aa11.93□□□□□ -0.5
POLR2J3-204ENST00000486319 A0A087X0M5 115 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 A0A1B0GX30 115 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 KIAA1324LA8MWY0 1029 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 VWC2LB2RUY7 222 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 TOR1AO14656 332 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 P0C879 139 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 ARHGDIBP52566 201 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 H2BFWTQ7Z2G1 175 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 LINC00311Q8N616 119 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 DDB2Q92466 427 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 RAB40CQ96S21 281 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 SLC25A31Q9H0C2 315 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 MAGT1Q9H0U3 335 aa11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 LYRM2Q9NU23 88 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-204ENST00000486319 RPS10-NUDT3A0A1W2PQS6 291 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 CHST1O43916 411 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 RPL23AP62750 156 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 IZUMO4Q1ZYL8 232 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 TMEM249Q2WGJ8 235 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 WDR25Q64LD2 544 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 OR4S2Q8NH73 311 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 C8orf46Q8TAG6 207 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 ZNF596Q8TC21 504 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 R3HDM4Q96D70 268 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 FBXL17Q9UF56 701 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 NIPBLQ6KC79 2804 aaeCLIP11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 MARCH11A6NNE9 402 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 FAM90A9PA6NNJ1 464 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 SYNGR2O43760 224 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 MED6O75586 246 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 JTBO76095 146 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 NXPH3O95157 252 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms