RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 IGKV1-16P04430 117 aa13.28□□□□□ -0.28
THBS3-207ENST00000486260 MC5RP33032 325 aa13.28□□□□□ -0.28
THBS3-207ENST00000486260 LYG2Q86SG7 212 aa13.28□□□□□ -0.28
THBS3-207ENST00000486260 CASTOR1Q8WTX7 329 aa13.28□□□□□ -0.28
THBS3-207ENST00000486260 GLYATL2Q8WU03 294 aa13.28□□□□□ -0.28
THBS3-207ENST00000486260 ZNF48Q96MX3 618 aaPredicted RBP13.28□□□□□ -0.28
THBS3-207ENST00000486260 CDC42EP3Q9UKI2 254 aa13.28□□□□□ -0.28
THBS3-207ENST00000486260 WASHC3Q9Y3C0 194 aa13.28□□□□□ -0.28
THBS3-207ENST00000486260 A0A0B4J293 547 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 VENTXO95231 258 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 CRYZL1O95825 349 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 IL5P05113 134 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 CD1BP29016 333 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 BRS3P32247 399 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 KIR2DS2P43631 304 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 TAGLNQ01995 201 aaKnown RBP13.27□□□□□ -0.28
THBS3-207ENST00000486260 TMEM187Q14656 261 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 RTL8BQ17RB0 113 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 FBLN7Q53RD9 439 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 C11orf88Q6PI97 169 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 TCTEX1D1Q8N7M0 179 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 SSX3Q99909 188 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 NAV3Q8IVL0 2385 aa13.27□□□□□ -0.28
THBS3-207ENST00000486260 FAM90A9PA6NNJ1 464 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 IGKV1D-33P01593 117 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 IGKV1-33P01594 117 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 SERPINE2P07093 398 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 SNRNP70P08621 437 aaKnown RBP13.27□□□□□ -0.29
THBS3-207ENST00000486260 RRASP10301 218 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 UCP1P25874 307 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 LPAR6P43657 344 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 TATDN3Q17R31 274 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 PDPNQ86YL7 162 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 OR4S2Q8NH73 311 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 CD300LFQ8TDQ1 290 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 RITA1Q96K30 269 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 TMEM222Q9H0R3 208 aa13.27□□□□□ -0.29
THBS3-207ENST00000486260 PRAF2O60831 178 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 S1PR2O95136 353 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 ANXA3P12429 323 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 SRD5A1P18405 259 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 HES1Q14469 280 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 HNF4GQ14541 408 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 LRRC75BQ2VPJ9 315 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 ANKRD55Q3KP44 614 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 LHFPL5Q8TAF8 219 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 PIFOQ8TCI5 191 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
THBS3-207ENST00000486260 FLYWCH2Q96CP2 140 aaKnown RBP13.26□□□□□ -0.29
THBS3-207ENST00000486260 RBFOX2O43251 390 aaKnown RBP eCLIP13.25□□□□□ -0.29
THBS3-207ENST00000486260 IGKV1-39P01597 117 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 IGKV1D-39P04432 117 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 DYNLT3P51808 116 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 LIN54Q6MZP7 749 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 ZNF431Q8TF32 576 aaPredicted RBP13.25□□□□□ -0.29
THBS3-207ENST00000486260 GPN1Q9HCN4 374 aaPredicted RBP13.25□□□□□ -0.29
THBS3-207ENST00000486260 FAM212BQ9NTI7 297 aaPredicted RBP13.25□□□□□ -0.29
THBS3-207ENST00000486260 ALG5Q9Y673 324 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 A0A0A6YYJ9 748 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 H3BUX3 64 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 DUS4LO95620 317 aaKnown RBP13.25□□□□□ -0.29
THBS3-207ENST00000486260 CDS2O95674 445 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 HPRT1P00492 218 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 DHRS7BQ6IAN0 325 aaPredicted RBP13.25□□□□□ -0.29
THBS3-207ENST00000486260 Q6YL49 198 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 LIAT1Q6ZQX7 453 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 THNSL2Q86YJ6 484 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 SIGLECL1Q8N7X8 197 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 OR4C13Q8NGP0 309 aa13.25□□□□□ -0.29
THBS3-207ENST00000486260 EAF1Q96JC9 268 aaPredicted RBP13.25□□□□□ -0.29
THBS3-207ENST00000486260 NSD1Q96L73 2696 aaPredicted RBP13.24□□□□□ -0.29
THBS3-207ENST00000486260 MTORP42345 2549 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 SHOXO15266 292 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 MOSP00540 346 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 IGHV4-59P01825 116 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 FAM106CPP0CH98 169 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 RPS16P62249 146 aaKnown RBP13.24□□□□□ -0.29
THBS3-207ENST00000486260 EBI3Q14213 229 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 AANATQ16613 207 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 TUSC1Q2TAM9 212 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 TMEM177Q53S58 311 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 OR2T10Q8NGZ9 312 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 MITD1Q8WV92 249 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 HARBI1Q96MB7 349 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 TMEM56Q96MV1 263 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 PLEKHA2Q9HB19 425 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 TMEM56-RWDD3S4R434 201 aa13.24□□□□□ -0.29
THBS3-207ENST00000486260 C7orf66A4D0T2 115 aa13.23□□□□□ -0.29
THBS3-207ENST00000486260 SRRM4A7MD48 611 aaKnown RBP13.23□□□□□ -0.29
THBS3-207ENST00000486260 CREBL2O60519 120 aaPredicted RBP13.23□□□□□ -0.29
THBS3-207ENST00000486260 RPA2P15927 270 aa13.23□□□□□ -0.29
THBS3-207ENST00000486260 CNTFRP26992 372 aa13.23□□□□□ -0.29
THBS3-207ENST00000486260 IER3P46695 156 aa13.23□□□□□ -0.29
THBS3-207ENST00000486260 BCAP31P51572 246 aa13.23□□□□□ -0.29
THBS3-207ENST00000486260 TMEM268Q5VZI3 342 aa13.23□□□□□ -0.29
THBS3-207ENST00000486260 ZNF695Q8IW36 515 aa13.23□□□□□ -0.29
THBS3-207ENST00000486260 SELENOHQ8IZQ5 122 aaKnown RBP13.23□□□□□ -0.29
THBS3-207ENST00000486260 VKORC1L1Q8N0U8 176 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms