RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ZNF343Q6P1L6 599 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 CALHM1Q8IU99 346 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 TMEM183AQ8IXX5 376 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 OR1L1Q8NH94 360 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 HSD17B10Q99714 261 aaKnown RBP9.41□□□□□ -0.9
HDAC6-228ENST00000486227 PIMREGQ9BSJ6 248 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 MRPS18CQ9Y3D5 142 aaKnown RBP9.41□□□□□ -0.9
HDAC6-228ENST00000486227 PCNX1Q96RV3 2341 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 DOCK7Q96N67 2140 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 PKDREJQ9NTG1 2253 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 TRAV34A0A0B4J273 112 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 A0A1B0GU03 582 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 GYPAP02724 150 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 RBP4P02753 201 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 CD5P06127 495 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF735P0CB33 412 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 AGAP20933 346 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 LGALS7P47929 136 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 LY6DQ14210 128 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 WDR73Q6P4I2 378 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 ZBTB34Q8NCN2 500 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 TICRRQ7Z2Z1 1910 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF407Q9C0G0 2248 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF716A6NP11 495 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 MPV17P39210 176 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 PCP4P48539 62 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 CTAG1AP78358 180 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 ASPHD2Q6ICH7 369 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 UNQ6494/PRO21346Q6UXR6 183 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 MUC15Q8N387 334 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 BMPERQ8N8U9 685 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 OR5B3Q8NH48 314 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 MISP3Q96FF7 219 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 PAM16Q9Y3D7 125 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 MYO7BQ6PIF6 2116 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 TP53BP1Q12888 1972 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-228ENST00000486227 C11orf94C9JXX5 98 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 SNRNP200O75643 2136 aaKnown RBP9.4□□□□□ -0.9
HDAC6-228ENST00000486227 MPZP25189 248 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 ERVFRD-1P60508 538 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 COX19Q49B96 90 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 TIMM23BQ5SRD1 257 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 SAXO1Q8IYX7 474 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 WDYHV1Q96HA8 205 aa9.4□□□□□ -0.9
HDAC6-228ENST00000486227 DIDO1Q9BTC0 2240 aaKnown RBP9.4□□□□□ -0.9
HDAC6-228ENST00000486227 CTXND1A0A1B0GTU2 59 aa9.4□□□□□ -0.91
HDAC6-228ENST00000486227 H0YIZ8 118 aa9.4□□□□□ -0.91
HDAC6-228ENST00000486227 PTGDSP41222 190 aa9.4□□□□□ -0.91
HDAC6-228ENST00000486227 PAFAH1B2P68402 229 aa9.4□□□□□ -0.91
HDAC6-228ENST00000486227 GALNT14Q96FL9 552 aa9.4□□□□□ -0.91
HDAC6-228ENST00000486227 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.91
HDAC6-228ENST00000486227 ARL2-SNX15V9GYD0 113 aa9.4□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF506Q5JVG8 444 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 ACSM6Q6P461 480 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 ZIC4Q8N9L1 334 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 OR5P3Q8WZ94 311 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 TMEM222Q9H0R3 208 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 OR1A1Q9P1Q5 309 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 ABCA4P78363 2273 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 PHF3Q92576 2039 aaKnown RBP9.39□□□□□ -0.91
HDAC6-228ENST00000486227 TCF21O43680 179 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 TNXAQ16473 311 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF596Q8TC21 504 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 BCL2L2Q92843 193 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-228ENST00000486227 SRD5A3Q9H8P0 318 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 CLCF1Q9UBD9 225 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF785A8K8V0 405 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 B9A039 149 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 REG1BP48304 166 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 PLAURQ03405 335 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 STARD4Q96DR4 205 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 TRBV6-7A0A0A0MS04 114 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 IGKV1-9A0A0C4DH69 117 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 CECR9P0C854 216 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 PDLIM4P50479 330 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 FAM27E3Q08E93 113 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 GRAMD2BQ96HH9 432 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 ELOVL1Q9BW60 279 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 REPIN1Q9BWE0 567 aaKnown RBP9.39□□□□□ -0.91
HDAC6-228ENST00000486227 C1QTNF5Q9BXJ0 243 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF835Q9Y2P0 537 aa9.39□□□□□ -0.91
HDAC6-228ENST00000486227 MEF2BQ02080 365 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-228ENST00000486227 Q0VFX4 171 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 CXorf66Q5JRM2 361 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-228ENST00000486227 MYPOPQ86VE0 399 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-228ENST00000486227 CCL19Q99731 98 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 TMUB1Q9BVT8 246 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 CBLN4Q9NTU7 201 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 H0Y8G0 127 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 PDE6DO43924 150 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 RHBDL1O75783 438 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 HARBI1Q96MB7 349 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 ODAMA1E959 279 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 WNT9BO14905 357 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 PAGE4O60829 102 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 PGLYRP1O75594 196 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-228ENST00000486227 RPEL1Q2QD12 228 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 NRN1LQ496H8 165 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms