RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 FAM192AQ9GZU8 254 aa5.9□□□□□ -1.46
XRN1-212ENST00000486211 MRPL27Q9P0M9 148 aaKnown RBP5.9□□□□□ -1.46
XRN1-212ENST00000486211 EXOSC1Q9Y3B2 195 aaKnown RBP5.9□□□□□ -1.46
XRN1-212ENST00000486211 GMPPBQ9Y5P6 360 aa5.9□□□□□ -1.46
XRN1-212ENST00000486211 TCRBV5S2A0A599 114 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 CA1P00915 261 aaPredicted RBP5.89□□□□□ -1.47
XRN1-212ENST00000486211 IGHV3-23P01764 117 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 OR2T7P0C7T2 308 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 ATP6V1B2P21281 511 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 ZNF85Q03923 595 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 SLC25A30Q5SVS4 291 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 CLEC19AQ6UXS0 136 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 PDPNQ86YL7 162 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 OR5D14Q8NGL3 314 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 FRZBQ92765 325 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 ASB9Q96DX5 294 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 PELI1Q96FA3 418 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 PHB2Q99623 299 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 C6orf62Q9GZU0 229 aaPredicted RBP5.89□□□□□ -1.47
XRN1-212ENST00000486211 MDFICQ9P1T7 246 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 GNG8Q9UK08 70 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 X6R8D5 127 aa5.89□□□□□ -1.47
XRN1-212ENST00000486211 OR4C46A6NHA9 309 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 OR4C45A6NMZ5 311 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 MCRIP1C9JLW8 97 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 GIG44P09565 113 aaPredicted RBP5.88□□□□□ -1.47
XRN1-212ENST00000486211 MIFP14174 115 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 SERPINA2P20848 420 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 GALP22466 123 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 CCR9P51686 369 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 ELLP55199 621 aaPredicted RBP5.88□□□□□ -1.47
XRN1-212ENST00000486211 RAB12Q6IQ22 244 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 HS3ST5Q8IZT8 346 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 TTC9CQ8N5M4 171 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 OR10H4Q8NGA5 316 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 MRPL30Q8TCC3 161 aaKnown RBP5.88□□□□□ -1.47
XRN1-212ENST00000486211 SRSF12Q8WXF0 261 aaKnown RBP5.88□□□□□ -1.47
XRN1-212ENST00000486211 CPNE2Q96FN4 548 aaPredicted RBP5.88□□□□□ -1.47
XRN1-212ENST00000486211 GPER1Q99527 375 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 TEX12Q9BXU0 123 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 METTL9Q9H1A3 318 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 MAGIXQ9H6Y5 334 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 SPACA1Q9HBV2 294 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 S4R3C0 116 aa5.88□□□□□ -1.47
XRN1-212ENST00000486211 C15orf61A6NNL5 157 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 SRRM4A7MD48 611 aaKnown RBP5.87□□□□□ -1.47
XRN1-212ENST00000486211 ZNF705EA8MWA4 302 aaPredicted RBP5.87□□□□□ -1.47
XRN1-212ENST00000486211 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
XRN1-212ENST00000486211 B2RBV5 119 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 CA11O75493 328 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 HMGN3Q15651 99 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 C19orf35Q6ZS72 473 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 FAM220AQ7Z4H9 259 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 TMEM163Q8TC26 289 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 GALMQ96C23 342 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 FGFR1OP2Q9NVK5 253 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 KCNIP1Q9NZI2 227 aa5.87□□□□□ -1.47
XRN1-212ENST00000486211 NBDYA0A0U1RRE5 68 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 ITGB1BP1O14713 200 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 MPPED1O15442 326 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 GPX5O75715 221 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 GTF2F2P13984 249 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 MYOD1P15172 320 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 RAB3AP20336 220 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 PRKACGP22612 351 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 PSMB6P28072 239 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 TNXAQ16473 311 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 PRSS8Q16651 343 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 SIGIRRQ6IA17 410 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 LAMTOR1Q6IAA8 161 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 GID4Q8IVV7 300 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 CENPSQ8N2Z9 138 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 ATP6V1G3Q96LB4 118 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 OR14A2Q96R54 314 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 ELAC2Q9BQ52 826 aaKnown RBP5.86□□□□□ -1.47
XRN1-212ENST00000486211 H2AFY2Q9P0M6 372 aaPredicted RBP5.86□□□□□ -1.47
XRN1-212ENST00000486211 WARS2Q9UGM6 360 aaKnown RBP5.86□□□□□ -1.47
XRN1-212ENST00000486211 STEAP1Q9UHE8 339 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 PFDN2Q9UHV9 154 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 UFC1Q9Y3C8 167 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 PEX16Q9Y5Y5 336 aa5.86□□□□□ -1.47
XRN1-212ENST00000486211 IGHV3-35A0A0C4DH35 117 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 UBE2QL1A1L167 161 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 APOA2P02652 100 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 CTSDP07339 412 aaPredicted RBP5.85□□□□□ -1.47
XRN1-212ENST00000486211 CAPGP40121 348 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 RPS27AP62979 156 aaKnown RBP5.85□□□□□ -1.47
XRN1-212ENST00000486211 PTGES3Q15185 160 aaKnown RBP5.85□□□□□ -1.47
XRN1-212ENST00000486211 KLK9Q2XQG4 91 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 SLC22A6Q4U2R8 563 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 FAM98BQ52LJ0 330 aaKnown RBP5.85□□□□□ -1.47
XRN1-212ENST00000486211 C10orf55Q5SWW7 151 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 GLT8D1Q68CQ7 371 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 IL1F10Q8WWZ1 152 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 TMEM190Q8WZ59 177 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 NSL1Q96IY1 281 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 FAM210BQ96KR6 192 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 HARBI1Q96MB7 349 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 C17orf77Q96MU5 243 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 IL4I1Q96RQ9 567 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms