RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ZNF90Q03938 601 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 PRDX4Q13162 271 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 KRTAP21-3Q3LHN1 58 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 SFRP2Q96HF1 295 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 HDHD2Q9H0R4 259 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 KLK5Q9Y337 293 aaPredicted RBP0.97□□□□□ -2.25
GCFC2-209ENST00000486016 POLR3HQ9Y535 204 aaPredicted RBP0.97□□□□□ -2.25
GCFC2-209ENST00000486016 ATP6V1DQ9Y5K8 247 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 DSCAMO60469 2012 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 RTEL1-TNFRSF6BF6WH68 1400 aa0.97□□□□□ -2.25
GCFC2-209ENST00000486016 CHD5Q8TDI0 1954 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 A0A087WUU8 490 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 A0A0A6YYH2 397 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 TRGV5A0A0B4J1U4 118 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 A6NJ64 397 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 J3QQQ9 107 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 TYMSP04818 313 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 TPM3P06753 285 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 BPGMP07738 259 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 COX5BP10606 129 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 RPL27AP46776 148 aaKnown RBP0.96□□□□□ -2.26
GCFC2-209ENST00000486016 GABRA2P47869 451 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 CDC34P49427 236 aaPredicted RBP0.96□□□□□ -2.26
GCFC2-209ENST00000486016 RPL26P61254 145 aaKnown RBP0.96□□□□□ -2.26
GCFC2-209ENST00000486016 TBPL1P62380 186 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 HOXC5Q00444 222 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 GNA12Q03113 381 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 MED21Q13503 144 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 PPP1R1AQ13522 171 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 HSP90B2PQ58FF3 399 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 SAPCD1Q5SSQ6 148 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 N4BP2L1Q5TBK1 243 aaPredicted RBP0.96□□□□□ -2.26
GCFC2-209ENST00000486016 CST9Q5W186 159 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 LHFPL1Q86WI0 220 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 Q8N402 240 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 TMEM156Q8N614 296 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 SMCR5Q8TEV8 140 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 C12orf43Q96C57 262 aaKnown RBP0.96□□□□□ -2.26
GCFC2-209ENST00000486016 ANKRD36BP1Q96IX9 119 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 NMNAT3Q96T66 252 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 TTTY13Q9BZ97 58 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 DRC3Q9H069 523 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 TMEM222Q9H0R3 208 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 HES4Q9HCC6 221 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 RPL26L1Q9UNX3 145 aaKnown RBP0.96□□□□□ -2.26
GCFC2-209ENST00000486016 AMMECR1Q9Y4X0 333 aaPredicted RBP0.96□□□□□ -2.26
GCFC2-209ENST00000486016 GBF1Q92538 1859 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 SLX4Q8IY92 1834 aa0.96□□□□□ -2.26
GCFC2-209ENST00000486016 C9JCJ5 164 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 BHLHE40O14503 412 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 TXNDC9O14530 226 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 PFDN6O15212 129 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 SSNA1O43805 119 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 NPYP01303 97 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 IL3P08700 152 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 UCHL1P09936 223 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 C8orf88P0DMB2 117 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 RAP1GDS1P52306 607 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 BLVRAP53004 296 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 TPM4P67936 248 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 MLLT11Q13015 90 aaPredicted RBP0.95□□□□□ -2.26
GCFC2-209ENST00000486016 UAP1Q16222 522 aaPredicted RBP0.95□□□□□ -2.26
GCFC2-209ENST00000486016 PLPPR5Q32ZL2 321 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 PABPC1L2AQ5JQF8 200 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 TNFAIP8L2Q6P589 184 aaPredicted RBP0.95□□□□□ -2.26
GCFC2-209ENST00000486016 FAM151BQ6UXP7 276 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 Q6ZTI0 123 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 SLC35E3Q7Z769 313 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 GPHB5Q86YW7 130 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 UBL4BQ8N7F7 174 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 TMEM161BQ8NDZ6 487 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 OR13C8Q8NGS7 320 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 OR5J2Q8NH18 312 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 HAVCR2Q8TDQ0 301 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 RAB2BQ8WUD1 216 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 ZNF625Q96I27 306 aaPredicted RBP0.95□□□□□ -2.26
GCFC2-209ENST00000486016 TIMM21Q9BVV7 248 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 MAP1LC3AQ9H492 121 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 BABAM2Q9NXR7 383 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 TAAR3PQ9P1P4 343 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 POLR1DQ9Y2S0 133 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 C15orf41Q9Y2V0 281 aa0.95□□□□□ -2.26
GCFC2-209ENST00000486016 EIF4G1Q04637 1599 aaKnown RBP0.95□□□□□ -2.26
GCFC2-209ENST00000486016 KDM5BQ9UGL1 1544 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 DENND4BO75064 1496 aaPredicted RBP0.94□□□□□ -2.26
GCFC2-209ENST00000486016 GRIN2BQ13224 1484 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 NCKAP5O14513 1909 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 TMSB15BA0A087X1C1 80 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 TRAV41A0A0B4J266 112 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 A0A1B0GVG6 124 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 RFPL4AA6NLU0 287 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 RFPL4AL1F8VTS6 287 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 COX7A2LO14548 114 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 APOMO95445 188 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 REG1AP05451 166 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 DDTP30046 118 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 CCR2P41597 374 aa0.94□□□□□ -2.26
GCFC2-209ENST00000486016 FKBP1AP62942 108 aaKnown RBP0.94□□□□□ -2.26
GCFC2-209ENST00000486016 ERHP84090 104 aaKnown RBP0.94□□□□□ -2.26
GCFC2-209ENST00000486016 SLC36A2Q495M3 483 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms