RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 PRELID3BQ9Y3B1 194 aa9.43□□□□□ -0.9
HLA-DOA-204ENST00000485901 TSSC4Q9Y5U2 329 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOA-204ENST00000485901 IGHV7-81A0A0B4J1V7 117 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 LINC00473A8K010 186 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 SHOXO15266 292 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 SPDEFO95238 335 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 IGLV2-14P01704 120 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 PMP2P02689 132 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 IGF1P05019 195 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 VDAC1P21796 283 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 HLA-DMAP28067 261 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 RCVRNP35243 200 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 RFX2P48378 723 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 DYRK1AQ13627 763 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 MSMO1Q15800 293 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 TMEM177Q53S58 311 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 TCTEX1D4Q5JR98 221 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 TEX38Q6PEX7 206 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 SECTM1Q8WVN6 248 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 DDB2Q92466 427 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 SLC5A7Q9GZV3 580 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 OR51J1Q9H342 316 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 METTL1Q9UBP6 276 aaKnown RBP9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 ZNF580Q9UK33 172 aa9.42□□□□□ -0.9
HLA-DOA-204ENST00000485901 FCN1O00602 326 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 FXYD4P59646 89 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 HERV-K104P61576 105 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 CX3CL1P78423 397 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 EGFEM1PQ0D2K5 195 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 C10orf99Q6UWK7 81 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 ZNF562Q6V9R5 426 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 ZNF66Q6ZN08 573 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 MFSD4AQ8N468 514 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 OR6F1Q8NGZ6 308 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 OSR1Q8TAX0 266 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 FCAMRQ8WWV6 532 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 BORCS5Q969J3 196 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 HARBI1Q96MB7 349 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 ABHD1Q96SE0 405 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 ZNF2Q9BSG1 426 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 DCUN1D5Q9BTE7 237 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 SLIRPQ9GZT3 109 aaKnown RBP9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 C6orf62Q9GZU0 229 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 MIXL1Q9H2W2 232 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 CCL28Q9NRJ3 127 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 ZFP57Q9NU63 452 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 RABL2AQ9UBK7 228 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 RABL2BQ9UNT1 228 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 DNAH9Q9NYC9 4486 aa9.41□□□□□ -0.9
HLA-DOA-204ENST00000485901 ZNF701M0R085 212 aaPredicted RBP9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 SLC25A17O43808 307 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 FCGR3BO75015 233 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 CRYZL1O95825 349 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 ELANEP08246 267 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 SLC6A1P30531 599 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 HRH1P35367 487 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 TSPAN5P62079 268 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 TMEM267Q0VDI3 215 aaPredicted RBP9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 VMA21Q3ZAQ7 101 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 KCTD9Q7L273 389 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 PPP1R27Q86WC6 154 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 LAX1Q8IWV1 398 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 TEX45Q8NA69 505 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 DIRAS2Q96HU8 199 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 CLCC1Q96S66 551 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 PARP11Q9NR21 331 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 RSL24D1Q9UHA3 163 aaKnown RBP9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 WSB1Q9Y6I7 421 aa9.4□□□□□ -0.9
HLA-DOA-204ENST00000485901 A0A1W2PRX2 142 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 SRRM4A7MD48 611 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 K7EIL1 84 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 ATP6V0E1O15342 81 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 IGLV2-23P01705 113 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 IGHG4P01861 327 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 PF4V1P10720 104 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 RPL30P62888 115 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 MRPS10P82664 201 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 FOXE3Q13461 319 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 EIF4EBP1Q13541 118 aaPredicted RBP9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 ACTBL2Q562R1 376 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 CXorf66Q5JRM2 361 aaPredicted RBP9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 PYHIN1Q6K0P9 492 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 LPCAT3Q6P1A2 487 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 OR52I2Q8NH67 350 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 MCFD2Q8NI22 146 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 TCTEX1D2Q8WW35 142 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 MOB3AQ96BX8 217 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 B9D2Q9BPU9 175 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 TAS2R8Q9NYW2 309 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 KLK11Q9UBX7 282 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
HLA-DOA-204ENST00000485901 TRAV41A0A0B4J266 112 aa9.38□□□□□ -0.91
HLA-DOA-204ENST00000485901 G3V318 75 aa9.38□□□□□ -0.91
HLA-DOA-204ENST00000485901 GABARAPH6UMI1 98 aa9.38□□□□□ -0.91
HLA-DOA-204ENST00000485901 TNFSF12O43508 249 aa9.38□□□□□ -0.91
HLA-DOA-204ENST00000485901 CNIH1O95406 144 aa9.38□□□□□ -0.91
HLA-DOA-204ENST00000485901 CA2P00918 260 aa9.38□□□□□ -0.91
HLA-DOA-204ENST00000485901 PF4P02776 101 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms