RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 PARP12Q9H0J9 701 aaKnown RBP8.94□□□□□ -0.98
DDX56-212ENST00000485367 ARHGAP32A7KAX9 2087 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 J3QW42 95 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 M0QZK8 103 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 ITGB1BP1O14713 200 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 SERPINA2P20848 420 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 FGF7P21781 194 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 DTYMKP23919 212 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 PPP1CCP36873 323 aaKnown RBP8.93□□□□□ -0.98
DDX56-212ENST00000485367 GRB2P62993 217 aaKnown RBP8.93□□□□□ -0.98
DDX56-212ENST00000485367 DLK1P80370 383 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 USF2Q15853 346 aaPredicted RBP8.93□□□□□ -0.98
DDX56-212ENST00000485367 KRTAP24-1Q3LI83 254 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 KHDC3LQ587J8 217 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 CDPF1Q6NVV7 123 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 FBXW12Q6X9E4 464 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 LIAT1Q6ZQX7 453 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 ZNF429Q86V71 674 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 C1orf87Q8N0U7 546 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 OR8B12Q8NGG6 310 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 RNASEH2CQ8TDP1 164 aaKnown RBP8.93□□□□□ -0.98
DDX56-212ENST00000485367 ITLN1Q8WWA0 313 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 GNPNAT1Q96EK6 184 aaPredicted RBP8.93□□□□□ -0.98
DDX56-212ENST00000485367 GPR84Q9NQS5 396 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 TMEM106BQ9NUM4 274 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 NECAP2Q9NVZ3 263 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 ANXA10Q9UJ72 324 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 MMP24Q9Y5R2 645 aa8.93□□□□□ -0.98
DDX56-212ENST00000485367 DVL1O14640 695 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 CDS2O95674 445 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 LCATP04180 440 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 FHITP49789 147 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 GNG10P50151 68 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 RND2P52198 227 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 UCP3P55916 312 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 PRSS12P56730 875 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 PIGPP57054 158 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 KISS1Q15726 138 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 KRTAP27-1Q3LI81 207 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 ABCA11PQ4W5N1 156 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 SPSB3Q6PJ21 355 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 TMEM182Q6ZP80 229 aaPredicted RBP8.92□□□□□ -0.98
DDX56-212ENST00000485367 COMMD2Q86X83 199 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 OR10AD1Q8NGE0 317 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 PP6455Q8WZ26 134 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 OR2V2Q96R30 315 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
DDX56-212ENST00000485367 SLC25A31Q9H0C2 315 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 RIMS4Q9H426 269 aaPredicted RBP8.92□□□□□ -0.98
DDX56-212ENST00000485367 IL19Q9UHD0 177 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 PITPNC1Q9UKF7 332 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 HSF4Q9ULV5 492 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 PPP1R3CQ9UQK1 317 aa8.92□□□□□ -0.98
DDX56-212ENST00000485367 IGHV3-64DA0A0J9YX35 117 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 SMCO3A2RU48 225 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 ZNF732B4DXR9 585 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 TCF21O43680 179 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 GGCTO75223 188 aaKnown RBP8.91□□□□□ -0.98
DDX56-212ENST00000485367 SCAF4O95104 1147 aaKnown RBP8.91□□□□□ -0.98
DDX56-212ENST00000485367 CXCL1P09341 107 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 ZNF728P0DKX0 622 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 OR5H8P0DN80 308 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 MMP9P14780 707 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 ZNF121P58317 390 aaPredicted RBP8.91□□□□□ -0.98
DDX56-212ENST00000485367 RND3P61587 244 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 RPP30P78346 268 aaKnown RBP8.91□□□□□ -0.98
DDX56-212ENST00000485367 LCN2P80188 198 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 EWSR1Q01844 656 aaKnown RBP eCLIP8.91□□□□□ -0.98
DDX56-212ENST00000485367 MALLQ13021 153 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 COLCA1Q6ZS62 124 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 Q6ZSR3 168 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 ZNF283Q8N7M2 679 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 CCDC71LQ8N9Z2 235 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 OR4D5Q8NGN0 318 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 OR14K1Q8NGZ2 314 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 OR2G3Q8NGZ4 309 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 RTN4IP1Q8WWV3 396 aaPredicted RBP8.91□□□□□ -0.98
DDX56-212ENST00000485367 SPTSSAQ969W0 71 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 BSCL2Q96G97 398 aaPredicted RBP8.91□□□□□ -0.98
DDX56-212ENST00000485367 SPACA5Q96QH8 159 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 C19orf24Q9BVV8 132 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 C1QTNF5Q9BXJ0 243 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 SH3BGRL3Q9H299 93 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 PNRC2Q9NPJ4 139 aaKnown RBP8.91□□□□□ -0.98
DDX56-212ENST00000485367 TRBV24-1A0A075B6N3 115 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 A0A1W2PP11 408 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 TRDCB7Z8K6 153 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 H0YL77 283 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 CYB5BO43169 146 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 IGLV3-1P01715 115 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 ERVFRD-1P60508 538 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 HLA-DRB3P79483 266 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 BAXQ07812 192 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 HAGHQ16775 308 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 AKR1C8PQ5T2L2 129 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 OR2C3Q8N628 320 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 FAM210BQ96KR6 192 aa8.91□□□□□ -0.98
DDX56-212ENST00000485367 SPIN2AQ99865 258 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms