RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 AMTNQ6UX39 209 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 OR10P1Q8NGE3 313 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 FNDC9Q8TBE3 224 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 TLNRD1Q9H1K6 362 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 SMDT1Q9H4I9 107 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 FBXO5Q9UKT4 447 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 NID2Q14112 1375 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 SHANK1Q9Y566 2161 aa2.46□□□□□ -2.02
VPS13A-211ENST00000484581 DCCP43146 1447 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 A0A087WUJ7 227 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 LOC102725191A0A1B0GVB3 256 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 VGLL3A8MV65 326 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 C9JCJ5 164 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 CRYGDP07320 174 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 HRES1P13985 223 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 PSME3P61289 254 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 TNFAIP6P98066 277 aaPredicted RBP2.45□□□□□ -2.02
VPS13A-211ENST00000484581 NOXRED1Q6NXP6 359 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 ZNF664Q8N3J9 261 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 LHFPL5Q8TAF8 219 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 RAD51AP1Q96B01 352 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 C12orf43Q96C57 262 aaKnown RBP2.45□□□□□ -2.02
VPS13A-211ENST00000484581 DCUN1D1Q96GG9 259 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 FAM96AQ9H5X1 160 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 GLTPQ9NZD2 209 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 TAAR3PQ9P1P4 343 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 AK3Q9UIJ7 227 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 SNX12Q9UMY4 172 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 KLK5Q9Y337 293 aaPredicted RBP2.45□□□□□ -2.02
VPS13A-211ENST00000484581 ZNF407Q9C0G0 2248 aa2.45□□□□□ -2.02
VPS13A-211ENST00000484581 ADAMTSL1Q8N6G6 1762 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 A0A1B0GW54 56 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 A0A1W2PQ67 120 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 INMT-MINDY4F8WBC2 141 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 BHLHE40O14503 412 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 PSCAO43653 123 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 SYNGR2O43760 224 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 LY6HO94772 140 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 NDUFB2O95178 105 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 HAND1O96004 215 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 FGF6P10767 208 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 SLC25A16P16260 332 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 CRYBB3P26998 211 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 GZMMP51124 257 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 ZNF140P52738 457 aaPredicted RBP2.44□□□□□ -2.02
VPS13A-211ENST00000484581 FKBP1AP62942 108 aaKnown RBP2.44□□□□□ -2.02
VPS13A-211ENST00000484581 CAV1Q03135 178 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 TMEM97Q5BJF2 176 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 CCDC121Q6ZUS5 278 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 GPHB5Q86YW7 130 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 UMODL1-AS1Q8N2C9 162 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 SLC22A24Q8N4F4 322 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 OR11H1Q8NG94 326 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 OR4K13Q8NH42 304 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 OR10A6Q8NH74 314 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 RAB2BQ8WUD1 216 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 DGCR14Q96DF8 476 aaKnown RBP2.44□□□□□ -2.02
VPS13A-211ENST00000484581 PPP1R2P1Q96PQ5 205 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 OR8B2Q96RD0 313 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 MGLLQ99685 303 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 MND1Q9BWT6 205 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 GPR84Q9NQS5 396 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 ANGPT4Q9Y264 503 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 ARL2BPQ9Y2Y0 163 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 COQ4Q9Y3A0 265 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 TRPM6Q9BX84 2022 aa2.44□□□□□ -2.02
VPS13A-211ENST00000484581 COL4A4P53420 1690 aaPredicted RBP2.44□□□□□ -2.02
VPS13A-211ENST00000484581 PTPRJQ12913 1337 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 CACNA1SQ13698 1873 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 IGHV3-73A0A0B4J1V6 119 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 PQLC2LA1A4F0 135 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 GRIFINA4D1Z8 144 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 C17orf51A8MQB3 221 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 PSMD12O00232 456 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-211ENST00000484581 COX7A2LO14548 114 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 SULT1B1O43704 296 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 IGLV3-19P01714 112 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 CCL3P10147 92 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 ZNF22P17026 224 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-211ENST00000484581 HIST1H1TP22492 207 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-211ENST00000484581 LGALS9BQ3B8N2 356 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 DEFB134Q4QY38 66 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 LGALS9CQ6DKI2 356 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 WDR59Q6PJI9 974 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 ZNF322Q6U7Q0 402 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-211ENST00000484581 IGFL3Q6UXB1 125 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 C20orf196Q8IYI0 205 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 ZNF561Q8N587 486 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 DAND5Q8N907 189 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 OR2T4Q8NH00 348 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 SGMS2Q8NHU3 365 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 ROPN1LQ96C74 230 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 IGF2BP2-AS1Q96M15 143 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 HIGD2AQ9BW72 106 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 DCSTAMPQ9H295 470 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 CXorf21Q9HAI6 301 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 MRPL27Q9P0M9 148 aaKnown RBP2.43□□□□□ -2.02
VPS13A-211ENST00000484581 HEY1Q9Y5J3 304 aa2.43□□□□□ -2.02
VPS13A-211ENST00000484581 COL18A1P39060 1754 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms