RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 SLC25A48Q6ZT89 311 aaKnown RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 SLC7A5P1Q8MH63 180 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 ZCCHC24Q8N2G6 241 aaKnown RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 LINC00311Q8N616 119 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 OR2C3Q8N628 320 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 FAM216BQ8N7L0 139 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 TPRX1Q8N7U7 411 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 UBAC2Q8NBM4 344 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF439Q8NDP4 499 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 OR52E5Q8NH55 327 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 CT45A3Q8NHU0 189 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 C8orf46Q8TAG6 207 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 NEUROG1Q92886 237 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 RAB1CQ92928 201 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 TNFRSF14Q92956 283 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 SMIM8Q96KF7 97 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 AIFM2Q9BRQ8 373 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 DCTN5Q9BTE1 182 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 SLC25A31Q9H0C2 315 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 PARP12Q9H0J9 701 aaKnown RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 OR2D2Q9H210 308 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 ARV1Q9H2C2 271 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 LYRM2Q9NU23 88 aaPredicted RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 MIOXQ9UGB7 285 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 RNF150Q9ULK6 438 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 KCNS2Q9ULS6 477 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 PSG11Q9UQ72 335 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 PRELID3BQ9Y3B1 194 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 WSB1Q9Y6I7 421 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 KIAA2026Q5HYC2 2103 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 BORCS7-ASMTA0A0B4J1R7 106 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 C17orf98A8MV24 154 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 DVL1O14640 695 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 FGF16O43320 207 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 SYNGR2O43760 224 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 CHST1O43916 411 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 SCAF4O95104 1147 aaKnown RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 IGKV1-5P01602 117 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 IGHV2-70P01814 119 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 TFF1P04155 84 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 NMBP08949 121 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 RRASP10301 218 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 NDUFB7P17568 137 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 COL8A2P25067 703 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 THBS3P49746 956 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 RPL23AP62750 156 aaKnown RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 RPL30P62888 115 aaKnown RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 VAMP2P63027 116 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 SNTB1Q13884 538 aaKnown RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 CXorf66Q5JRM2 361 aaPredicted RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 DHRS7BQ6IAN0 325 aaPredicted RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 C11orf71Q6IPW1 123 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 FAM71F2Q6NXP2 309 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 Q6ZRM9 215 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 PDZD9Q8IXQ8 264 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 SPAG16Q8N0X2 631 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 EIF4E3Q8N5X7 224 aaKnown RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM252Q8N6L7 170 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 RNF141Q8WVD5 230 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 TCTEX1D2Q8WW35 142 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 DDB2Q92466 427 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 SAT2Q96F10 170 aaPredicted RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 TIMD4Q96H15 378 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF714Q96N38 554 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 S1PR3Q99500 378 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 ABHD14AQ9BUJ0 271 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF471Q9BX82 626 aaPredicted RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 IFI27L2Q9H2X8 130 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 DCAF16Q9NXF7 216 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 HSPB7Q9UBY9 170 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 RCL1Q9Y2P8 373 aaKnown RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 LSM5Q9Y4Y9 91 aaKnown RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 DSCAMO60469 2012 aa4.44□□□□□ -1.7
COL17A1-206ENST00000483876 PRKDCP78527 4128 aaKnown RBP4.44□□□□□ -1.7
COL17A1-206ENST00000483876 HCFC1P51610 2035 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ARFGEF3Q5TH69 2177 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ROS1P08922 2347 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 IGHV3-43A0A0B4J1X8 118 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 hCG_1809904A0A1W2PP81 198 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 A0A1W2PPE2 198 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 A0A1W2PR64 198 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 A0A1W2PRV1 198 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 MSGN1A6NI15 193 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 LINC00473A8K010 186 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 WRBO00258 174 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ST8SIA5O15466 376 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 CD5LO43866 347 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 SPDEFO95238 335 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 IL6RP08887 468 aaPredicted RBP4.43□□□□□ -1.7
COL17A1-206ENST00000483876 FGF2P09038 288 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 SEC11BP0C7V7 166 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 IGHV3-43DP0DP04 118 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 NQO2P16083 231 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF16P17020 682 aaPredicted RBP4.43□□□□□ -1.7
COL17A1-206ENST00000483876 OMGP23515 440 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 SULT1A1P50225 295 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 RAB5CP51148 216 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF137PP52743 207 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 AKR1C2P52895 323 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms