RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 DYRK1AQ13627 763 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 IDO2Q6ZQW0 420 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 DDB2Q92466 427 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 HARBI1Q96MB7 349 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 RANGRFQ9HD47 186 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-221ENST00000483778 C19orf73Q9NVV2 129 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 SHOXO15266 292 aa13.74□□□□□ -0.21
ATG4B-221ENST00000483778 PSMD7P51665 324 aa13.74□□□□□ -0.21
ATG4B-221ENST00000483778 SYNJ2BPP57105 145 aa13.74□□□□□ -0.21
ATG4B-221ENST00000483778 H1FOOQ8IZA3 346 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-221ENST00000483778 CNBD2Q96M20 576 aa13.74□□□□□ -0.21
ATG4B-221ENST00000483778 ELOVL1Q9BW60 279 aa13.74□□□□□ -0.21
ATG4B-221ENST00000483778 TINAGL1Q9GZM7 467 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-221ENST00000483778 STUB1Q9UNE7 303 aa13.74□□□□□ -0.21
ATG4B-221ENST00000483778 DYNC2H1Q8NCM8 4307 aaKnown RBP13.73□□□□□ -0.21
ATG4B-221ENST00000483778 IZUMO1RA6ND01 250 aa13.73□□□□□ -0.21
ATG4B-221ENST00000483778 H3BUA1 57 aa13.73□□□□□ -0.21
ATG4B-221ENST00000483778 PRH1P02810 166 aa13.73□□□□□ -0.21
ATG4B-221ENST00000483778 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
ATG4B-221ENST00000483778 TBCEQ15813 527 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-221ENST00000483778 ZNF343Q6P1L6 599 aa13.73□□□□□ -0.21
ATG4B-221ENST00000483778 ANKRD13BQ86YJ7 626 aa13.73□□□□□ -0.21
ATG4B-221ENST00000483778 TM2D3Q9BRN9 247 aa13.73□□□□□ -0.21
ATG4B-221ENST00000483778 A0A0G2JLM5 398 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 CRYZL1O95825 349 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 CSN3P07498 182 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 RAB6AP20340 208 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 ZP3P21754 424 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 MRPS15P82914 257 aaKnown RBP13.72□□□□□ -0.21
ATG4B-221ENST00000483778 TAGLNQ01995 201 aaKnown RBP13.72□□□□□ -0.21
ATG4B-221ENST00000483778 PRSS8Q16651 343 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 C22orf42Q6IC83 251 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 IZUMO2Q6UXV1 221 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 ZNF367Q7RTV3 350 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 ADAD2Q8NCV1 583 aaKnown RBP13.72□□□□□ -0.21
ATG4B-221ENST00000483778 OR9G4Q8NGQ1 327 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 GINS4Q9BRT9 223 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 ATG5Q9H1Y0 275 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 NDUFB11Q9NX14 153 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 COA4Q9NYJ1 87 aa13.72□□□□□ -0.21
ATG4B-221ENST00000483778 PEF1Q9UBV8 284 aaKnown RBP13.72□□□□□ -0.21
ATG4B-221ENST00000483778 RBM7Q9Y580 266 aaKnown RBP13.72□□□□□ -0.21
ATG4B-221ENST00000483778 TRDV1A0A1B0GX56 115 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 PDCD5O14737 125 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 BRI3O95415 125 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 RAB3BP20337 219 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 GADD45AP24522 165 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 RPL30P62888 115 aaKnown RBP13.71□□□□□ -0.21
ATG4B-221ENST00000483778 ZNF45Q02386 682 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 ARFRP1Q13795 201 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 TNXAQ16473 311 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 CDNFQ49AH0 187 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 C10orf55Q5SWW7 151 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 ADAMTSL5Q6ZMM2 481 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 TEX45Q8NA69 505 aa13.71□□□□□ -0.21
ATG4B-221ENST00000483778 THAP7Q9BT49 309 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-221ENST00000483778 UBE2KP61086 200 aa13.7□□□□□ -0.22
ATG4B-221ENST00000483778 RTL8BQ17RB0 113 aa13.7□□□□□ -0.22
ATG4B-221ENST00000483778 Q6ZS49 121 aa13.7□□□□□ -0.22
ATG4B-221ENST00000483778 ST6GALNAC5Q9BVH7 336 aa13.7□□□□□ -0.22
ATG4B-221ENST00000483778 ZMAT4Q9H898 229 aa13.7□□□□□ -0.22
ATG4B-221ENST00000483778 ZNF430Q9H8G1 570 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-221ENST00000483778 AKIP1Q9NQ31 210 aa13.7□□□□□ -0.22
ATG4B-221ENST00000483778 CSMD3Q7Z407 3707 aa13.7□□□□□ -0.22
ATG4B-221ENST00000483778 IGKV1D-13A0A0B4J2D9 117 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 DIRAS3O95661 229 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 IGLV2-14P01704 120 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 OR9G9P0C7N8 305 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 IGKV1-13P0DP09 117 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 LYL1P12980 280 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 NFYAP23511 347 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-221ENST00000483778 TALDO1P37837 337 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 MECP2P51608 486 aaKnown RBP13.69□□□□□ -0.22
ATG4B-221ENST00000483778 OR2B11Q5JQS5 317 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 ZFAND6Q6FIF0 208 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 C19orf35Q6ZS72 473 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 SRSF12Q8WXF0 261 aaKnown RBP13.69□□□□□ -0.22
ATG4B-221ENST00000483778 TMEM68Q96MH6 324 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 CITED4Q96RK1 184 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 PHB2Q99623 299 aa13.69□□□□□ -0.22
ATG4B-221ENST00000483778 A8MZ25 164 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 BMPR1BO00238 502 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 SAA1P0DJI8 122 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-221ENST00000483778 RRASP10301 218 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 EDN2P20800 178 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 MYL9P24844 172 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 BRWD1-AS2P59051 145 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 RHOGP84095 191 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 VMA21Q3ZAQ7 101 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 VKORC1L1Q8N0U8 176 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 NUDCD2Q8WVJ2 157 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 ACOT12Q8WYK0 555 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 USMG5Q96IX5 58 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 GPHA2Q96T91 129 aa13.68□□□□□ -0.22
ATG4B-221ENST00000483778 METTL21EPA6NDL7 271 aa13.67□□□□□ -0.22
ATG4B-221ENST00000483778 HMX3A6NHT5 357 aa13.67□□□□□ -0.22
ATG4B-221ENST00000483778 E7EUB6 86 aa13.67□□□□□ -0.22
ATG4B-221ENST00000483778 SSX5O60225 188 aa13.67□□□□□ -0.22
ATG4B-221ENST00000483778 FCGR3BO75015 233 aa13.67□□□□□ -0.22
ATG4B-221ENST00000483778 AADACP22760 399 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms