RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 CATR1Q13166 79 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 PSG5Q15238 335 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 LPCAT3Q6P1A2 487 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 TMEM17Q86X19 198 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 NDUFA11Q86Y39 141 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 OR51J1Q9H342 316 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 FBXL15Q9H469 300 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 CCL28Q9NRJ3 127 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 TAS2R8Q9NYW2 309 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
RPP40-206ENST00000483546 KLK11Q9UBX7 282 aa12.32□□□□□ -0.44
RPP40-206ENST00000483546 IFNA6P05013 189 aa12.31□□□□□ -0.44
RPP40-206ENST00000483546 CD83Q01151 205 aa12.31□□□□□ -0.44
RPP40-206ENST00000483546 RNASE10Q5GAN6 216 aaKnown RBP12.31□□□□□ -0.44
RPP40-206ENST00000483546 CMTM1Q8IZ96 169 aa12.31□□□□□ -0.44
RPP40-206ENST00000483546 MFSD4AQ8N468 514 aa12.31□□□□□ -0.44
RPP40-206ENST00000483546 TMEM229BQ8NBD8 167 aa12.31□□□□□ -0.44
RPP40-206ENST00000483546 OR4S2Q8NH73 311 aa12.31□□□□□ -0.44
RPP40-206ENST00000483546 HSPB9Q9BQS6 159 aa12.31□□□□□ -0.44
RPP40-206ENST00000483546 IGHV7-81A0A0B4J1V7 117 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 FABP12A6NFH5 140 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 RBFOX2O43251 390 aaKnown RBP eCLIP12.3□□□□□ -0.443e-12■■■■■ 42.4
RPP40-206ENST00000483546 GSTZ1O43708 216 aaPredicted RBP12.3□□□□□ -0.44
RPP40-206ENST00000483546 CREBL2O60519 120 aaPredicted RBP12.3□□□□□ -0.44
RPP40-206ENST00000483546 FCGR3BO75015 233 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 CRYZL1O95825 349 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 IGLV2-23P01705 113 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 CD74P04233 296 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 CSF1P09603 554 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 CD28P10747 220 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 VDAC1P21796 283 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 PTBP1P26599 531 aaKnown RBP eCLIP12.3□□□□□ -0.44
RPP40-206ENST00000483546 S100GP29377 79 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 CRIP2P52943 208 aaPredicted RBP12.3□□□□□ -0.44
RPP40-206ENST00000483546 UCP3P55916 312 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 DGCR2P98153 550 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 ZNF562Q6V9R5 426 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 PPP1R27Q86WC6 154 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 TEX45Q8NA69 505 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 TCTEX1D2Q8WW35 142 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 NOL4LQ96MY1 436 aaPredicted RBP12.3□□□□□ -0.44
RPP40-206ENST00000483546 SOSTQ9BQB4 213 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 AIFM2Q9BRQ8 373 aa12.3□□□□□ -0.44
RPP40-206ENST00000483546 PLXNB1O43157 2135 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 LINC01548A6NM66 108 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 SLC25A17O43808 307 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 GNRHRP30968 328 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 UBE2KP61086 200 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 RPL30P62888 115 aaKnown RBP12.29□□□□□ -0.44
RPP40-206ENST00000483546 MEF2DQ14814 521 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 RNASE12Q5GAN4 147 aaKnown RBP12.29□□□□□ -0.44
RPP40-206ENST00000483546 TEX38Q6PEX7 206 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 ZNF818PQ6ZRF7 136 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 TCTEX1D1Q8N7M0 179 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 C11orf44Q8N8P7 122 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 POC5Q8NA72 575 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 CD300LFQ8TDQ1 290 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
RPP40-206ENST00000483546 CITED2Q99967 270 aaPredicted RBP12.29□□□□□ -0.44
RPP40-206ENST00000483546 FXYD6Q9H0Q3 95 aa12.29□□□□□ -0.44
RPP40-206ENST00000483546 TSSC4Q9Y5U2 329 aaPredicted RBP12.29□□□□□ -0.44
RPP40-206ENST00000483546 DPPA5A6NC42 116 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 GPR31O00270 319 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 ATP6V0E1O15342 81 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 HRASP01112 189 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 CD3DP04234 171 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 CRYGBP07316 175 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 ELANEP08246 267 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 SLC6A1P30531 599 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 CX3CL1P78423 397 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 CFHR3Q02985 330 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 TMEM267Q0VDI3 215 aaPredicted RBP12.28□□□□□ -0.44
RPP40-206ENST00000483546 STEAP1BQ6NZ63 245 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 SLC38A6Q8IZM9 456 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 VSTM2AQ8TAG5 236 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 PARP11Q9NR21 331 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 ZFP57Q9NU63 452 aa12.28□□□□□ -0.44
RPP40-206ENST00000483546 TCRBV4S1A1TA0A5B7 111 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 RAB3DO95716 219 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 CA2P00918 260 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 IGHG4P01861 327 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 ETV6P41212 452 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 FOXE3Q13461 319 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 ZNF329Q86UD4 541 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 RNF152Q8N8N0 203 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 OR4F17Q8NGA8 305 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 ZNF486Q96H40 463 aaPredicted RBP12.27□□□□□ -0.45
RPP40-206ENST00000483546 OR4F4Q96R69 305 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 RSRP1Q9BUV0 290 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 FAM212BQ9NTI7 297 aaPredicted RBP12.27□□□□□ -0.45
RPP40-206ENST00000483546 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.45
RPP40-206ENST00000483546 WNK1Q9H4A3 2382 aa12.26□□□□□ -0.45
RPP40-206ENST00000483546 TRAV41A0A0B4J266 112 aa12.26□□□□□ -0.45
RPP40-206ENST00000483546 SRRM4A7MD48 611 aaKnown RBP12.26□□□□□ -0.45
RPP40-206ENST00000483546 M0QYG6 137 aa12.26□□□□□ -0.45
RPP40-206ENST00000483546 FCN1O00602 326 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms