RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 MINDY2Q8NBR6 621 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 MYOZ3Q8TDC0 251 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 SLC25A46Q96AG3 418 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 UBE2E2Q96LR5 201 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 HARBI1Q96MB7 349 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 DUX3Q96PT4 197 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 C6orf62Q9GZU0 229 aaPredicted RBP10.84□□□□□ -0.67
VARS-225ENST00000482996 AURKAIP1Q9NWT8 199 aaPredicted RBP10.84□□□□□ -0.67
VARS-225ENST00000482996 ANXA10Q9UJ72 324 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 VSIG4Q9Y279 399 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 OR2W1Q9Y3N9 320 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 A0A1W2PN81 502 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 J3QRK9 145 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 SHOXO15266 292 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 SSX5O60225 188 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 CA2P00918 260 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 NFYAP23511 347 aaPredicted RBP10.83□□□□□ -0.68
VARS-225ENST00000482996 CD40LGP29965 261 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 CHRNA7P36544 502 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 RPS19P39019 145 aaKnown RBP10.83□□□□□ -0.68
VARS-225ENST00000482996 RAB9AP51151 201 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 ARPC4P59998 168 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 ZNF491Q8N8L2 437 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 BVESQ8NE79 360 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 OR5M8Q8NGP6 311 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 MRAPQ8TCY5 172 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 C5orf30Q96GV9 206 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 KLK15Q9H2R5 256 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 ADAM30Q9UKF2 790 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 FBXO7Q9Y3I1 522 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 NUBP2Q9Y5Y2 271 aa10.83□□□□□ -0.68
VARS-225ENST00000482996 RGS5O15539 181 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 CNIH1O95406 144 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 HLA-DQB1P01920 261 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 DUTP33316 252 aaKnown RBP10.82□□□□□ -0.68
VARS-225ENST00000482996 FXYD3Q14802 87 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 AKIRIN2Q53H80 203 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 TMEM177Q53S58 311 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 ACTBL2Q562R1 376 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 C19orf54Q5BKX5 351 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 PYHIN1Q6K0P9 492 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 UNQ5815/PRO19632Q6UWF5 114 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 ZNF645Q8N7E2 425 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 BEST4Q8NFU0 473 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 GRPEL2Q8TAA5 225 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 ACOT12Q8WYK0 555 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 ARPC1AQ92747 370 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 S100A16Q96FQ6 103 aaKnown RBP10.82□□□□□ -0.68
VARS-225ENST00000482996 AUNIPQ9H7T9 357 aa10.82□□□□□ -0.68
VARS-225ENST00000482996 ZMAT5Q9UDW3 170 aaKnown RBP10.82□□□□□ -0.68
VARS-225ENST00000482996 EGR2P11161 476 aaPredicted RBP10.81□□□□□ -0.68
VARS-225ENST00000482996 CBX5P45973 191 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 GNB1P62873 340 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 RUNX1Q01196 453 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 KIAA0141Q14154 515 aaPredicted RBP10.81□□□□□ -0.68
VARS-225ENST00000482996 VMA21Q3ZAQ7 101 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 UBE2NLQ5JXB2 153 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 LFNGQ8NES3 379 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 OR11H1Q8NG94 326 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
VARS-225ENST00000482996 FAM103A1Q9BTL3 118 aaKnown RBP10.81□□□□□ -0.68
VARS-225ENST00000482996 GNB4Q9HAV0 340 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 TPSG1Q9NRR2 321 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 PRELID3BQ9Y3B1 194 aa10.81□□□□□ -0.68
VARS-225ENST00000482996 XRCC3O43542 346 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 SOX15O60248 233 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 TUSC2O75896 110 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 CRYZL1O95825 349 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 IGLV2-23P01705 113 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 OR8U8P0C7N1 319 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 HOXD3P31249 432 aaPredicted RBP10.8□□□□□ -0.68
VARS-225ENST00000482996 FHL3Q13643 280 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 KCTD9Q7L273 389 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 HOGA1Q86XE5 327 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 SAMD12Q8N8I0 201 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 OR1N2Q8NGR9 330 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 OSR1Q8TAX0 266 aaPredicted RBP10.8□□□□□ -0.68
VARS-225ENST00000482996 DDB2Q92466 427 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 OR5B12Q96R08 314 aa10.8□□□□□ -0.68
VARS-225ENST00000482996 MRPS7Q9Y2R9 242 aaKnown RBP10.8□□□□□ -0.68
VARS-225ENST00000482996 RBMX2Q9Y388 322 aaKnown RBP10.8□□□□□ -0.68
VARS-225ENST00000482996 IGKV1D-13A0A0B4J2D9 117 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 SRRM4A7MD48 611 aaKnown RBP10.79□□□□□ -0.68
VARS-225ENST00000482996 LINC00473A8K010 186 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 I3L521 148 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 CRYGBP07316 175 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 IGKV1-13P0DP09 117 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 UBE2KP61086 200 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 ZNF616Q08AN1 781 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 EGFEM1PQ0D2K5 195 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 GVQW1Q8N7I0 195 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 TEX45Q8NA69 505 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 TMEM68Q96MH6 324 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 HSD17B10Q99714 261 aaKnown RBP10.79□□□□□ -0.68
VARS-225ENST00000482996 SLIRPQ9GZT3 109 aaKnown RBP10.79□□□□□ -0.68
VARS-225ENST00000482996 SLA2Q9H6Q3 261 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 IFT46Q9NQC8 304 aa10.79□□□□□ -0.68
VARS-225ENST00000482996 FAM25AB3EWG3 89 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 FAM25CB3EWG5 89 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms