RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 MRPL21Q7Z2W9 205 aaKnown RBP12.04□□□□□ -0.48
COL9A2-207ENST00000482722 SGMS2Q8NHU3 365 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 PSMF1Q92530 271 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 TMEM9BQ9NQ34 198 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 COL27A1Q8IZC6 1860 aaPredicted RBP12.04□□□□□ -0.48
COL9A2-207ENST00000482722 FAM166BA8MTA8 275 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 C11orf94C9JXX5 98 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 CHRNB4P30926 498 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 SRSF7Q16629 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL9A2-207ENST00000482722 ZNF324BQ6AW86 544 aaPredicted RBP12.04□□□□□ -0.48
COL9A2-207ENST00000482722 OR2W1Q9Y3N9 320 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 TIMM9Q9Y5J7 89 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 DNPH1O43598 174 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 NGFP01138 241 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 CTXN2P0C2S0 81 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 RANP62826 216 aaKnown RBP12.04□□□□□ -0.48
COL9A2-207ENST00000482722 TUSC5Q8IXB3 177 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 ZNF114Q8NC26 417 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
COL9A2-207ENST00000482722 DERL1Q9BUN8 251 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 ZDHHC11Q9H8X9 412 aa12.04□□□□□ -0.48
COL9A2-207ENST00000482722 ACACAQ13085 2346 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 SERF1AO75920 110 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 FGF12P61328 243 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 FFAR4Q5NUL3 377 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 PRRG4Q9BZD6 226 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 ZNF391Q9UJN7 358 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 KCNS2Q9ULS6 477 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 ADGRG4Q8IZF6 3080 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
COL9A2-207ENST00000482722 ZNF503-AS2A6NEH8 195 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 WDR1O75083 606 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 TNFSF15O95150 251 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 GNB1P62873 340 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 PAFAH1B2P68402 229 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 FOXL1Q12952 345 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 C3AR1Q16581 482 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 HES3Q5TGS1 186 aa12.03□□□□□ -0.48
COL9A2-207ENST00000482722 RNASE8Q8TDE3 154 aaKnown RBP12.03□□□□□ -0.48
COL9A2-207ENST00000482722 ZNF552Q9H707 407 aaPredicted RBP12.03□□□□□ -0.48
COL9A2-207ENST00000482722 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
COL9A2-207ENST00000482722 PCNX1Q96RV3 2341 aa12.02□□□□□ -0.48
COL9A2-207ENST00000482722 TRAPPC2LH3BP13 241 aa12.02□□□□□ -0.48
COL9A2-207ENST00000482722 CLDN1O95832 211 aa12.02□□□□□ -0.48
COL9A2-207ENST00000482722 COMPP49747 757 aaPredicted RBP12.02□□□□□ -0.48
COL9A2-207ENST00000482722 MMDQ15546 238 aa12.02□□□□□ -0.48
COL9A2-207ENST00000482722 FAM90A10PA6NDY2 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A18PA6NE21 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A16PA6NEW6 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A20PA6NIJ5 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A7PA6NKC0 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A12PA8MX19 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 RBFOX2O43251 390 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 CBLN1P23435 193 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 UBE2G2P60604 165 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 TFF3Q07654 80 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 RIPPLY2Q5TAB7 128 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 OR5P3Q8WZ94 311 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 STRADBQ9C0K7 418 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 MSL2Q9HCI7 577 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 RNF114Q9Y508 228 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 USF3Q68DE3 2245 aa12.02□□□□□ -0.49
COL9A2-207ENST00000482722 ANKRD11Q6UB99 2663 aaPredicted RBP12.01□□□□□ -0.49
COL9A2-207ENST00000482722 F2Z2F3 143 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 NDUFB4O95168 129 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 MT-CO3P00414 261 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 CD99P14209 185 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 LHX2P50458 406 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 MSMO1Q15800 293 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 KRTAP27-1Q3LI81 207 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 ZNF585BQ52M93 769 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 PLA2G2CQ5R387 149 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 TMEM14EPQ6UXP3 125 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 Q8NFD4 153 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 SLC35E1Q96K37 410 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 IGLV2-14P01704 120 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 ATP5G3P48201 142 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 YPEL3P61236 119 aaPredicted RBP12.01□□□□□ -0.49
COL9A2-207ENST00000482722 MKXQ8IYA7 352 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 BTF3L4Q96K17 158 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 CIB3Q96Q77 187 aaPredicted RBP12.01□□□□□ -0.49
COL9A2-207ENST00000482722 SPAARA0A1B0GVQ0 90 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 NDUFB8O95169 186 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 SELENOTP62341 195 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 RBX1P62877 108 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 SSPNQ14714 243 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 SPATA46Q5T0L3 261 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 STPG4Q8N801 248 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 OR5AU1Q8NGC0 362 aa12.01□□□□□ -0.49
COL9A2-207ENST00000482722 CRISP2P16562 243 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms