RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 MAPRE2Q15555 327 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 TAF1AQ15573 450 aaPredicted RBP2.19□□□□□ -2.06
GTF3A-207ENST00000482655 TRIP13Q15645 432 aaPredicted RBP2.19□□□□□ -2.06
GTF3A-207ENST00000482655 ZNF791Q3KP31 576 aaPredicted RBP2.19□□□□□ -2.06
GTF3A-207ENST00000482655 CDNFQ49AH0 187 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 DNAL1Q4LDG9 190 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 RNASE13Q5GAN3 156 aaKnown RBP2.19□□□□□ -2.06
GTF3A-207ENST00000482655 FAM27D1Q5T7N8 215 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 HHATQ5VTY9 493 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 TMEM236Q5W0B7 351 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 SBSNQ6UWP8 590 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 C4orf22Q6V702 233 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 LINC00299Q6ZSB3 139 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 CA13Q8N1Q1 262 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 SYS1Q8N2H4 156 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 ZNF645Q8N7E2 425 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 CYB561A3Q8NBI2 242 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 OR1L1Q8NH94 360 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 DGCR14Q96DF8 476 aaKnown RBP2.19□□□□□ -2.06
GTF3A-207ENST00000482655 FAM19A4Q96LR4 140 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 FAM210AQ96ND0 272 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 RNF5Q99942 180 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 HINT2Q9BX68 163 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 UGT2B28Q9BY64 529 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 DRC3Q9H069 523 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 CENPHQ9H3R5 247 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 ZNF442Q9H7R0 627 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 TMEM100Q9NV29 134 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 NECAP2Q9NVZ3 263 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 RBFOX1Q9NWB1 397 aaKnown RBP2.19□□□□□ -2.06
GTF3A-207ENST00000482655 SDHAF2Q9NX18 166 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 C21orf62Q9NYP8 219 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 POMPQ9Y244 141 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 AP3M1Q9Y2T2 418 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 RNF11Q9Y3C5 154 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 CHCHD2Q9Y6H1 151 aaPredicted RBP2.19□□□□□ -2.06
GTF3A-207ENST00000482655 PKD1L1Q8TDX9 2849 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 NUP214P35658 2090 aaPredicted RBP2.19□□□□□ -2.06
GTF3A-207ENST00000482655 PCLOQ9Y6V0 5065 aa2.19□□□□□ -2.06
GTF3A-207ENST00000482655 DNAH9Q9NYC9 4486 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 ALPK2Q86TB3 2170 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 IGHV3-72A0A0B4J1Y9 119 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 TRAV40A0A0B4J280 105 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 ISPDA4D126 451 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 SMIM23A6NLE4 172 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 ZNF593O00488 134 aaPredicted RBP2.18□□□□□ -2.06
GTF3A-207ENST00000482655 ACOX3O15254 700 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 GYG2O15488 501 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 CST8O60676 142 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 CCNKO75909 580 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 KLHL2O95198 593 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 RCBTB2O95199 551 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 CYB5R3P00387 301 aaPredicted RBP2.18□□□□□ -2.06
GTF3A-207ENST00000482655 RPN2P04844 631 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 GABRA1P14867 456 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 IDO1P14902 403 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 PHBP35232 272 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 UGT2B10P36537 528 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 GPR4P46093 362 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 RPL5P46777 297 aaKnown RBP2.18□□□□□ -2.06
GTF3A-207ENST00000482655 AQP4P55087 323 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 PLGLB1Q02325 96 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 RELAQ04206 551 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 PRDX1Q06830 199 aaKnown RBP2.18□□□□□ -2.06
GTF3A-207ENST00000482655 DYNC1I2Q13409 638 aaKnown RBP2.18□□□□□ -2.06
GTF3A-207ENST00000482655 PDK2Q15119 407 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 BCL2A1Q16548 175 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 IDNKQ5T6J7 187 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 ZNF880Q6PDB4 577 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 SSX6Q7RTT6 188 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 NECAP1Q8NC96 275 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 OR5T1Q8NG75 326 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 SGMS2Q8NHU3 365 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 CIRBP-AS1Q8TBR5 109 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 NT5CQ8TCD5 201 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 LGALS14Q8TCE9 139 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 LZICQ8WZA0 190 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 SLC35B4Q969S0 331 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 PRAP1Q96NZ9 151 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 BIRC8Q96P09 236 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 QKIQ96PU8 341 aaKnown RBP eCLIP2.18□□□□□ -2.06
GTF3A-207ENST00000482655 TSC22D3Q99576 134 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 CIB1Q99828 191 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 BEX2Q9BXY8 128 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 TBL1XR1Q9BZK7 514 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 YIPF3Q9GZM5 350 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 RAB1BQ9H0U4 201 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 NLE1Q9NVX2 485 aaPredicted RBP2.18□□□□□ -2.06
GTF3A-207ENST00000482655 TMEM216Q9P0N5 145 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 TAC3Q9UHF0 121 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 CBY1Q9Y3M2 126 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 HEY1Q9Y5J3 304 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 ENPP4Q9Y6X5 453 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 DYNC2H1Q8NCM8 4307 aaKnown RBP2.18□□□□□ -2.06
GTF3A-207ENST00000482655 ROS1P08922 2347 aa2.18□□□□□ -2.06
GTF3A-207ENST00000482655 DPRXA6NFQ7 191 aa2.17□□□□□ -2.06
GTF3A-207ENST00000482655 TVP23AA6NH52 213 aa2.17□□□□□ -2.06
GTF3A-207ENST00000482655 ZNF850A8MQ14 1090 aa2.17□□□□□ -2.06
GTF3A-207ENST00000482655 TMEM114B3SHH9 223 aa2.17□□□□□ -2.06
GTF3A-207ENST00000482655 J3QT63 122 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms