RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 ZNF726P1Q15940 193 aa15.28■□□□□ 0.04
MRPL28-209ENST00000481453 TGIF2LYQ8IUE0 185 aa15.28■□□□□ 0.04
MRPL28-209ENST00000481453 ZNRF1Q8ND25 227 aa15.28■□□□□ 0.04
MRPL28-209ENST00000481453 Q8TCH9 128 aa15.28■□□□□ 0.04
MRPL28-209ENST00000481453 MBD3L1Q8WWY6 194 aa15.28■□□□□ 0.04
MRPL28-209ENST00000481453 CISD1Q9NZ45 108 aaKnown RBP15.28■□□□□ 0.04
MRPL28-209ENST00000481453 RNF7Q9UBF6 113 aa15.28■□□□□ 0.04
MRPL28-209ENST00000481453 CLN5O75503 358 aa15.27■□□□□ 0.04
MRPL28-209ENST00000481453 CXCL1P09341 107 aa15.27■□□□□ 0.04
MRPL28-209ENST00000481453 C1QTNF9P0C862 333 aa15.27■□□□□ 0.04
MRPL28-209ENST00000481453 SERF2P84101 59 aa15.27■□□□□ 0.04
MRPL28-209ENST00000481453 EIF4EBP1Q13541 118 aaPredicted RBP15.27■□□□□ 0.04
MRPL28-209ENST00000481453 ZNF674Q2M3X9 581 aa15.27■□□□□ 0.04
MRPL28-209ENST00000481453 NCMAPQ5T1S8 102 aa15.27■□□□□ 0.04
MRPL28-209ENST00000481453 RCC1LQ96I51 464 aaKnown RBP15.27■□□□□ 0.04
MRPL28-209ENST00000481453 CACNA1DQ01668 2161 aa15.27■□□□□ 0.03
MRPL28-209ENST00000481453 ODAMA1E959 279 aa15.27■□□□□ 0.03
MRPL28-209ENST00000481453 MGST3O14880 152 aa15.27■□□□□ 0.03
MRPL28-209ENST00000481453 ERVFRD-1P60508 538 aa15.27■□□□□ 0.03
MRPL28-209ENST00000481453 ZNF645Q8N7E2 425 aa15.27■□□□□ 0.03
MRPL28-209ENST00000481453 OR4C12Q96R67 309 aa15.27■□□□□ 0.03
MRPL28-209ENST00000481453 WDR61Q9GZS3 305 aaKnown RBP15.27■□□□□ 0.03
MRPL28-209ENST00000481453 DSCAMO60469 2012 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 CYB5R3P00387 301 aaPredicted RBP15.26■□□□□ 0.03
MRPL28-209ENST00000481453 SELLP14151 372 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 CR1LQ2VPA4 569 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 FAM90A2PQ658T7 463 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 SSX7Q7RTT5 188 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 ST6GALNAC3Q8NDV1 305 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 RFESDQ8TAC1 157 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 DCAF16Q9NXF7 216 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 ICE1Q9Y2F5 2266 aa15.26■□□□□ 0.03
MRPL28-209ENST00000481453 B4DEV8 164 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 FAM90A26D6RGX4 464 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 PPIHO43447 177 aaKnown RBP15.25■□□□□ 0.03
MRPL28-209ENST00000481453 CLDN1O95832 211 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 FABP1P07148 127 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 ADH4P08319 380 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 TNFSF4P23510 183 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 ELLP55199 621 aaPredicted RBP15.25■□□□□ 0.03
MRPL28-209ENST00000481453 SLC38A11Q08AI6 406 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 TMEM41BQ5BJD5 291 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 STUMQ69YW2 141 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 OR8G2PQ6IF36 304 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 TRAT1Q6PIZ9 186 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 DMRTC2Q8IXT2 367 aaPredicted RBP15.25■□□□□ 0.03
MRPL28-209ENST00000481453 OR2D2Q9H210 308 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 RAI1Q7Z5J4 1906 aaPredicted RBP15.25■□□□□ 0.03
MRPL28-209ENST00000481453 TGIF2-C20orf24A0A0A6YYL0 155 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 IGHV3-43A0A0B4J1X8 118 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 UBE2L5PA0A1B0GUS4 154 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 RAMP3O60896 148 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 IGHV3-43DP0DP04 118 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 OR2B11Q5JQS5 317 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 DUX4L9Q6RFH8 374 aaPredicted RBP15.25■□□□□ 0.03
MRPL28-209ENST00000481453 TAF15Q92804 592 aaKnown RBP eCLIP15.25■□□□□ 0.03
MRPL28-209ENST00000481453 PINX1Q96BK5 328 aaKnown RBP15.25■□□□□ 0.03
MRPL28-209ENST00000481453 PARD6GQ9BYG4 376 aaPredicted RBP15.25■□□□□ 0.03
MRPL28-209ENST00000481453 TMPRSS5Q9H3S3 457 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 RBKSQ9H477 322 aa15.25■□□□□ 0.03
MRPL28-209ENST00000481453 SHISA9B4DS77 424 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 KRASP01116 189 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 CD55P08174 381 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 HTD2P86397 168 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 TNFRSF9Q07011 255 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 ZCCHC24Q8N2G6 241 aaKnown RBP15.24■□□□□ 0.03
MRPL28-209ENST00000481453 ZNF808Q8N4W9 903 aaPredicted RBP15.24■□□□□ 0.03
MRPL28-209ENST00000481453 ZBTB34Q8NCN2 500 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 PPP1R35Q8TAP8 253 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 C17orf100A8MU93 164 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 CYB5BO43169 146 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 G6PCP35575 357 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 CASP6P55212 293 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 ZNF816Q0VGE8 651 aaPredicted RBP15.24■□□□□ 0.03
MRPL28-209ENST00000481453 NINJ1Q92982 152 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 SDSLQ96GA7 329 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 GSN-AS1Q9NRJ2 163 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 POLEQ07864 2286 aa15.24■□□□□ 0.03
MRPL28-209ENST00000481453 DYSFO75923 2080 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 MAP1LC3B2A6NCE7 125 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 SPINT2O43291 252 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 YIF1AO95070 293 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 RPL30P62888 115 aaKnown RBP15.23■□□□□ 0.03
MRPL28-209ENST00000481453 CCL8P80075 99 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 PNRC1Q12796 327 aaPredicted RBP15.23■□□□□ 0.03
MRPL28-209ENST00000481453 MSMO1Q15800 293 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 TMEM14EPQ6UXP3 125 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 CA5BP1Q8WTZ4 195 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 MAP1LC3BQ9GZQ8 125 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 VAX2Q9UIW0 290 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 CEBPZOSA8MTT3 80 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 HOXA5P20719 270 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 NDUFA6P56556 154 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 GAFA1Q96PS6 74 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 P2RX4Q99571 388 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 AGMATQ9BSE5 352 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 HSPB7Q9UBY9 170 aa15.23■□□□□ 0.03
MRPL28-209ENST00000481453 DEFB108AA8MXU0 73 aa15.22■□□□□ 0.03
MRPL28-209ENST00000481453 IFNA1P01562 189 aa15.22■□□□□ 0.03
MRPL28-209ENST00000481453 CGB3P0DN86 165 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms