RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 KBTBD11O94819 623 aa16.14■□□□□ 0.17
CCM2-214ENST00000481194 STXBP6Q8NFX7 210 aa16.14■□□□□ 0.17
CCM2-214ENST00000481194 SSC4DQ8WTU2 575 aa16.14■□□□□ 0.17
CCM2-214ENST00000481194 SSX2Q16385 188 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 TP53RKQ96S44 253 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 ZNF785A8K8V0 405 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 RPL35P42766 123 aaKnown RBP16.13■□□□□ 0.17
CCM2-214ENST00000481194 TMEM252Q8N6L7 170 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 RXFP4Q8TDU9 374 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 LEAP2Q969E1 77 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 NPVFQ9HCQ7 196 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 SERF2P84101 59 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 OR5R1Q8NH85 324 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 Q8TCH9 128 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 QTRT1Q9BXR0 403 aaKnown RBP16.13■□□□□ 0.17
CCM2-214ENST00000481194 GATA4P43694 442 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 DVL1P1P54792 670 aaPredicted RBP16.13■□□□□ 0.17
CCM2-214ENST00000481194 SLC35B1P78383 322 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 RPRMLQ8N4K4 120 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 NUP210LQ5VU65 1888 aa16.13■□□□□ 0.17
CCM2-214ENST00000481194 GUK1Q16774 197 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 TMEM231Q9H6L2 316 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 COL4A2P08572 1712 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 KIF26BQ2KJY2 2108 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 OR10C1Q96KK4 312 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 TMEM133Q9H2Q1 129 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 TMEM56-RWDD3S4R434 201 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 RBFOX2O43251 390 aaKnown RBP eCLIP16.12■□□□□ 0.171e-5■■■■□ 20.3
CCM2-214ENST00000481194 CD1BP29016 333 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 OR5B3Q8NH48 314 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 CRIM1Q9NZV1 1036 aa16.12■□□□□ 0.17
CCM2-214ENST00000481194 MLNRO43193 412 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 AGAP20933 346 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 LCN2P80188 198 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 RIF1Q5UIP0 2472 aaKnown RBP16.11■□□□□ 0.17
CCM2-214ENST00000481194 EFNB3Q15768 340 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 MORN2Q502X0 79 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 SPTA1P02549 2419 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 RNASEK-C17orf49H0YIS7 233 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 NUPL2O15504 423 aaKnown RBP16.11■□□□□ 0.17
CCM2-214ENST00000481194 SELENOTP62341 195 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 FLI1Q01543 452 aaPredicted RBP16.11■□□□□ 0.17
CCM2-214ENST00000481194 SMIM7Q9BQ49 75 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 OR5AC2Q9NZP5 309 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 XKRY2A2RUG3 117 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 RGS13O14921 159 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 SLC25A17O43808 307 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 NAPSAO96009 420 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 IGLV3-1P01715 115 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 ZNF735P0CB33 412 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 LYZP61626 148 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 RPL39P5Q59GN2 51 aa16.11■□□□□ 0.17
CCM2-214ENST00000481194 ZNF324BQ6AW86 544 aaPredicted RBP16.11■□□□□ 0.17
CCM2-214ENST00000481194 IGHV3-72A0A0B4J1Y9 119 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 NTF4P34130 210 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 BTCP35070 178 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 E7EQL1 145 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 PLA2G5P39877 138 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 ECSCRQ19T08 205 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 PCNX2A6NKB5 2137 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 TMEM155Q4W5P6 130 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 Q6P435 159 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 FAM186AA6NE01 2351 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 HEATR5AQ86XA9 2040 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 AANATQ16613 207 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 PARP11Q9NR21 331 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 TCF19Q9Y242 345 aa16.1■□□□□ 0.17
CCM2-214ENST00000481194 KHDC3LQ587J8 217 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 DPF1Q92782 380 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 ZNF835Q9Y2P0 537 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 CEACAM18A8MTB9 384 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 HKR1P10072 659 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 TVP23CQ96ET8 276 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 TRAV30A0A087WSZ9 112 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 FAM90A9PA6NNJ1 464 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 ZNF705FA8MVS1 300 aaPredicted RBP16.09■□□□□ 0.17
CCM2-214ENST00000481194 CFDP00746 253 aaPredicted RBP16.09■□□□□ 0.17
CCM2-214ENST00000481194 ZNF705DP0CH99 300 aaPredicted RBP16.09■□□□□ 0.17
CCM2-214ENST00000481194 ZNF705BP0CI00 300 aaPredicted RBP16.09■□□□□ 0.17
CCM2-214ENST00000481194 CGAP01215 116 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 M6PRP20645 277 aa16.09■□□□□ 0.17
CCM2-214ENST00000481194 CXorf66Q5JRM2 361 aaPredicted RBP16.09■□□□□ 0.17
CCM2-214ENST00000481194 COL5A1P20908 1838 aaPredicted RBP16.08■□□□□ 0.17
CCM2-214ENST00000481194 RPS10P46783 165 aaKnown RBP16.08■□□□□ 0.17
CCM2-214ENST00000481194 OR1B1Q8NGR6 318 aa16.08■□□□□ 0.17
CCM2-214ENST00000481194 ANGPTL6Q8NI99 470 aa16.08■□□□□ 0.17
CCM2-214ENST00000481194 DCTN5Q9BTE1 182 aa16.08■□□□□ 0.17
CCM2-214ENST00000481194 NKX6-2Q9C056 277 aaPredicted RBP16.08■□□□□ 0.17
CCM2-214ENST00000481194 LILRA1O75019 489 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 ZNF737O75373 536 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 CLEC3BP05452 202 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 MAS1LP35410 378 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 H2BFSP57053 126 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 B2MP61769 119 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 ARL16Q0P5N6 197 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 C10orf113Q5VZT2 155 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 CD55P08174 381 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 HIST1H1BP16401 226 aaKnown RBP16.08■□□□□ 0.16
CCM2-214ENST00000481194 CD177Q8N6Q3 437 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 NCOR1P1Q9H4R4 102 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms