RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	PSMD12	O00232	456 aa	Predicted RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	SLC17A3	O00476	420 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	TXNDC9	O14530	226 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	ATP5H	O75947	161 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGHV1-69	P01742	117 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	IFNA16	P05015	189 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	CRYGD	P07320	174 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	SERPINA6	P08185	405 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGHV3-30-3	P0DP02	117 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	GZMB	P10144	247 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	KCNE1	P15382	129 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	CTLA4	P16410	223 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	CD36	P16671	472 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	CXCL2	P19875	107 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	CXCL3	P19876	107 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	RPS12	P25398	132 aa	Known RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	BLVRB	P30043	206 aa	Predicted RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	CDKN2C	P42773	168 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	RPL27A	P46776	148 aa	Known RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	MARCKSL1	P49006	195 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	SPCS3	P61009	180 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	FGF12	P61328	243 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	RPS24	P62847	133 aa	Known RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	REEP5	Q00765	189 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	DEFA6	Q01524	100 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	EMX1	Q04741	257 aa	Predicted RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	BSPH1	Q075Z2	132 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	FADD	Q13158	208 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	HTR4	Q13639	388 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	JOSD1	Q15040	202 aa	Predicted RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	C4orf26	Q17RF5	130 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	MRPL51	Q4U2R6	128 aa	Known RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	ACSM3	Q53FZ2	586 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	MEST	Q5EB52	335 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM31	Q5JXX7	168 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	C1orf195	Q5TG92	126 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	GLT8D1	Q68CQ7	371 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR10K2	Q6IF99	312 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	RASL11A	Q6T310	242 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	LRRC34	Q8IZ02	419 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	RIBC1	Q8N443	379 aa	Predicted RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZFAND2A	Q8N6M9	145 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR11H1	Q8NG94	326 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR10P1	Q8NGE3	313 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR8J2	Q8NGG1	315 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR13C8	Q8NGS7	320 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR4X1	Q8NH49	305 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR2V1	Q8NHB1	315 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	MCFD2	Q8NI22	146 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	LHFPL5	Q8TAF8	219 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	HAVCR2	Q8TDQ0	301 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	EEF1AKMT1	Q8WVE0	214 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	ASB17	Q8WXJ9	295 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	RAD51AP1	Q96B01	352 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	ROPN1L	Q96C74	230 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	CAPZA3	Q96KX2	299 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	B9D2	Q9BPU9	175 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	CMSS1	Q9BQ75	279 aa	Known RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	MIEN1	Q9BRT3	115 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	ULBP3	Q9BZM4	244 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	TUBA4B	Q9H853	241 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	UCK1	Q9HA47	277 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	GPR84	Q9NQS5	396 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	RSL24D1	Q9UHA3	163 aa	Known RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	ANGPT4	Q9Y264	503 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZNF443	Q9Y2A4	671 aa	Predicted RBP	0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	LINC00588	Q9Y4M8	146 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	HEY1	Q9Y5J3	304 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	C2orf16	Q68DN1	1984 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	GRIN2B	Q13224	1484 aa		0.73	□□□□□ -2.29
CCNL1-223	ENST00000481173	PTPRJ	Q12913	1337 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	GBF1	Q92538	1859 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGKV1-12	A0A0C4DH73	117 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR6C6	A6NF89	314 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM210	A6NLX4	147 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR4C45	A6NMZ5	311 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM114	B3SHH9	223 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	C21orf140	B9A014	251 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173		J3QRK9	145 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	LECT2	O14960	151 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	CREBL2	O60519	120 aa	Predicted RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	NOS1AP	O75052	506 aa	Predicted RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	LY6H	O94772	140 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	APOM	O95445	188 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	NPY	P01303	97 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	IGKV1D-12	P01611	117 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	RPS17	P08708	135 aa	Known RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR5G3	P0C626	314 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZNF705D	P0CH99	300 aa	Predicted RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	HIST1H1E	P10412	219 aa	Known RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	GZMH	P20718	246 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	CRHBP	P24387	322 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	GABRA2	P47869	451 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	HINT1	P49773	126 aa	Predicted RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	CDK9	P50750	372 aa	Known RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	IDH3G	P51553	393 aa	Predicted RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	CTBP2	P56545	445 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR4D2	P58180	307 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TSPEAR-AS2	P59090	65 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TAS2R30	P59541	319 aa		0.72	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms