RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.99□□□□□ -1.45
LSM5-210ENST00000480956 TMX2-CTNND1H3BSU7 103 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 DEGS1O15121 323 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 GADD45GO95257 159 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 HLA-DRB1P01911 266 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 SOD3P08294 240 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 FBP1P09467 338 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 CDKN2AP42771 156 aaKnown RBP5.99□□□□□ -1.45
LSM5-210ENST00000480956 PSMB3P49720 205 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 PLPPR5Q32ZL2 321 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 ZFAND6Q6FIF0 208 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 LY6G5BQ8NDX9 201 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 KLK6Q92876 244 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 PTX4Q96A99 478 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 VSIG2Q96IQ7 327 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 NRIP2Q9BQI9 281 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 TMEM222Q9H0R3 208 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 HEXA-AS1Q9H8Q6 139 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 MRC1P22897 1456 aa5.99□□□□□ -1.45
LSM5-210ENST00000480956 SBF2Q86WG5 1849 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 LAMB4A4D0S4 1761 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 IGLV7-46A0A075B6I9 117 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 C5orf58C9J3I9 102 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 TMEM250H0YL14 139 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 LGALS9O00182 355 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 SOCS3O14543 225 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 CTSEP14091 401 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 GATA2P23769 480 aaPredicted RBP5.98□□□□□ -1.45
LSM5-210ENST00000480956 EMP1P54849 157 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 DEFA6Q01524 100 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 BTN1A1Q13410 526 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 C9orf47Q6ZRZ4 202 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 TCF24Q7RTU0 167 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 DCAF4L2Q8NA75 395 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 REEP6Q96HR9 211 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 LINC00597Q9H2U6 94 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 GON4LQ3T8J9 2241 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 KCPQ6ZWJ8 1503 aa5.98□□□□□ -1.45
LSM5-210ENST00000480956 BAZ2AQ9UIF9 1905 aaKnown RBP5.97□□□□□ -1.45
LSM5-210ENST00000480956 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
LSM5-210ENST00000480956 TRAPPC2LH3BP13 241 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 AIPO00170 330 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 LGALS1P09382 135 aaKnown RBP5.97□□□□□ -1.45
LSM5-210ENST00000480956 SERPINB10P48595 397 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 RPS20P60866 119 aaKnown RBP5.97□□□□□ -1.45
LSM5-210ENST00000480956 C7orf33Q8WU49 177 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 APOBEC3DQ96AK3 386 aaPredicted RBP5.97□□□□□ -1.45
LSM5-210ENST00000480956 CCDC115Q96NT0 180 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 RGS12O14924 1447 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 TJP1Q07157 1748 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 NHSQ6T4R5 1651 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 PTPRJQ12913 1337 aa5.97□□□□□ -1.45
LSM5-210ENST00000480956 IGHV3-74A0A0B4J1X5 117 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 A0A0X1KG70 313 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 FAM72CH0Y354 149 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 DLEU1O43261 78 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 LMX1BO60663 402 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 IGHV3-23P01764 117 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 FABP9Q0Z7S8 132 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 RSPO1Q2MKA7 263 aaPredicted RBP5.96□□□□□ -1.45
LSM5-210ENST00000480956 RNF212Q495C1 297 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 ZFP69Q49AA0 526 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 FAM72AQ5TYM5 149 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 FAM72DQ6L9T8 149 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 SMIM5Q71RC9 77 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 FAM72BQ86X60 149 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 ZNF584Q8IVC4 421 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 OR2T27Q8NH04 317 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 GPR146Q96CH1 333 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 LYSMD1Q96S90 227 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 SERPINI1Q99574 410 aa5.96□□□□□ -1.45
LSM5-210ENST00000480956 SIGLEC16A6NMB1 481 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 OR4C45A6NMZ5 311 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 KRBOX1C9JBD0 128 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 MRASO14807 208 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 C1QCP02747 245 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 DNAJB13P59910 316 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 HERVK_113P63121 156 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 BAMBIQ13145 260 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 RNF165Q6ZSG1 346 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 FA2HQ7L5A8 372 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 C1orf54Q8WWF1 131 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 F2RL3Q96RI0 385 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 C12orf57Q99622 126 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 TBL1XR1Q9BZK7 514 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 TMEM126AQ9H061 195 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 CDC42EP4Q9H3Q1 356 aaKnown RBP5.96□□□□□ -1.46
LSM5-210ENST00000480956 ANAPC10Q9UM13 185 aa5.96□□□□□ -1.46
LSM5-210ENST00000480956 ZNF706Q9Y5V0 76 aaPredicted RBP5.96□□□□□ -1.46
LSM5-210ENST00000480956 BCL9O00512 1426 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 A0A087WX48 190 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 CD5LO43866 347 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 C8GP07360 202 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 ORM2P19652 201 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 IMPA1P29218 277 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 C12orf74Q32Q52 190 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 ZNF497Q6ZNH5 498 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 LRRC28Q86X40 367 aaPredicted RBP5.95□□□□□ -1.46
LSM5-210ENST00000480956 CHST6Q9GZX3 395 aa5.95□□□□□ -1.46
LSM5-210ENST00000480956 AFDNP55196 1824 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms