RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 COMMD9Q9P000 198 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 CSPG4Q6UVK1 2322 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 A0A1B0GVG6 124 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 CYSRT1A8MQ03 144 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 RAMP3O60896 148 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 HPRT1P00492 218 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 APOA2P02652 100 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 EBI3Q14213 229 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 AANATQ16613 207 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 TMEM177Q53S58 311 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 RUSC1-AS1Q66K80 236 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 BRD3OSQ6XYD6 125 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 LGI3Q8N145 548 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 SLC35D1Q9NTN3 355 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 WASHC3Q9Y3C0 194 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 ACANP16112 2415 aa13.56□□□□□ -0.24
SCAMP3-207ENST00000480219 A8MV72 311 aaPredicted RBP13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 TIMM23O14925 209 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 FCGR3BO75015 233 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 SERPINE2P07093 398 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 CD99P14209 185 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 CBX3Q13185 183 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 SSX2Q16385 188 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 RTL8BQ17RB0 113 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 THNSL2Q86YJ6 484 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 SELENOHQ8IZQ5 122 aaKnown RBP13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 CASTOR1Q8WTX7 329 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 RBPMSQ93062 196 aaKnown RBP13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 RNF5Q99942 180 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 PRDM13Q9H4Q3 707 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 HILPDAQ9Y5L2 63 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 HIVEP1P15822 2718 aa13.55□□□□□ -0.24
SCAMP3-207ENST00000480219 A0A0U1RQK1 487 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 VENTXO95231 258 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 P0C879 139 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 SULT1A3P0DMM9 295 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 SULT1A4P0DMN0 295 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 LPAR6P43657 344 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 ARHGDIBP52566 201 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 RRAS2P62070 204 aaPredicted RBP13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 FAM120AOSQ5T036 256 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 OR4C13Q8NGP0 309 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 OSR1Q8TAX0 266 aaPredicted RBP13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 LSM10Q969L4 123 aaKnown RBP13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 RAB18Q9NP72 206 aa13.54□□□□□ -0.24
SCAMP3-207ENST00000480219 IGHV3OR16-10A0A075B7F0 116 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 S1PR2O95136 353 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 IGKV1-16P04430 117 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 FBP1P09467 338 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 NMSQ5H8A3 153 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 OR2B11Q5JQS5 317 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 TMEM268Q5VZI3 342 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 MOB3BQ86TA1 216 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 Q8N6K4 173 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 SEC22AQ96IW7 307 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 PRR13Q9NZ81 148 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
SCAMP3-207ENST00000480219 TLN2Q9Y4G6 2542 aa13.52□□□□□ -0.24
SCAMP3-207ENST00000480219 ATG12O94817 140 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 CRYZL1O95825 349 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 LY6G6DO95868 133 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 IGKV1-5P01602 117 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 NQO2P16083 231 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 VDAC1P21796 283 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 BRS3P32247 399 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 LYZL2Q7Z4W2 148 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 ZNF695Q8IW36 515 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 FAM219AQ8IW50 185 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 SLC35G3Q8N808 338 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 FLYWCH2Q96CP2 140 aaKnown RBP13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 AIFM2Q9BRQ8 373 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 MXRA5Q9NR99 2828 aa13.52□□□□□ -0.25
SCAMP3-207ENST00000480219 HMX3A6NHT5 357 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 SSNA1O43805 119 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 FGF2P09038 288 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 LGALS7P47929 136 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 BCAP31P51572 246 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 SRSF4Q08170 494 aaKnown RBP13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 C2orf68Q2NKX9 166 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 LIN54Q6MZP7 749 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 OR5M8Q8NGP6 311 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 PIFOQ8TCI5 191 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 MS4A7Q9GZW8 240 aaPredicted RBP13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 MED28Q9H204 178 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 YAE1D1Q9NRH1 226 aa13.51□□□□□ -0.25
SCAMP3-207ENST00000480219 IGHV3-72A0A0B4J1Y9 119 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 MARCH11A6NNE9 402 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 H7C2Y5 167 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 SPDEFO95238 335 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 HRASP01112 189 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 IGLV2-23P01705 113 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 SLC25A6P12236 298 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 FCN2Q15485 313 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 AARDQ4LEZ3 155 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 OR11H7Q8NGC8 314 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 R3HDM4Q96D70 268 aa13.5□□□□□ -0.25
SCAMP3-207ENST00000480219 EAF1Q96JC9 268 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms