RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 IGLV2-23P01705 113 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 SNRNP70P08621 437 aaKnown RBP10.5□□□□□ -0.73
CHD3-210ENST00000479080 P0C879 139 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 VAMP1P23763 118 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 CNTFRP26992 372 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 LPAR6P43657 344 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 BPIFB3P59826 476 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 CATR1Q13166 79 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 EBI3Q14213 229 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 TMEM177Q53S58 311 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 LIAT1Q6ZQX7 453 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 SGPP2Q8IWX5 399 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 SELENOHQ8IZQ5 122 aaKnown RBP10.5□□□□□ -0.73
CHD3-210ENST00000479080 MITD1Q8WV92 249 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 TMEM56Q96MV1 263 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 PRDM13Q9H4Q3 707 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 TMEM56-RWDD3S4R434 201 aa10.5□□□□□ -0.73
CHD3-210ENST00000479080 DBX1A6NMT0 343 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 RNF212BA8MTL3 300 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 INAFM1C9JVW0 142 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 RBFOX2O43251 390 aaKnown RBP eCLIP10.49□□□□□ -0.73
CHD3-210ENST00000479080 DUS4LO95620 317 aaKnown RBP10.49□□□□□ -0.73
CHD3-210ENST00000479080 CDS2O95674 445 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 CRYZL1O95825 349 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 DHFRP00374 187 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 IFNA2P01563 188 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 CD1BP29016 333 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 RIPPLY3P57055 190 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 MRGPRG-AS1Q2M3A8 158 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 PDPNQ86YL7 162 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 MS4A7Q9GZW8 240 aaPredicted RBP10.49□□□□□ -0.73
CHD3-210ENST00000479080 FAM212BQ9NTI7 297 aaPredicted RBP10.49□□□□□ -0.73
CHD3-210ENST00000479080 WASHC3Q9Y3C0 194 aa10.49□□□□□ -0.73
CHD3-210ENST00000479080 SONP18583 2426 aaKnown RBP10.49□□□□□ -0.73
CHD3-210ENST00000479080 CUBNO60494 3623 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 SNRPGP15A8MWD9 76 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 ADAP1O75689 374 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 IGKV1D-33P01593 117 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 IGKV1-33P01594 117 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 RPA2P15927 270 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 DYNLT3P51808 116 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 IZUMO4Q1ZYL8 232 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 CCDC144NLQ6NUI1 221 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 LYZL2Q7Z4W2 148 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 VKORC1L1Q8N0U8 176 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 SLC35G3Q8N808 338 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 OR4S2Q8NH73 311 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 WDR89Q96FK6 387 aaPredicted RBP10.48□□□□□ -0.73
CHD3-210ENST00000479080 SEC22AQ96IW7 307 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 EAF1Q96JC9 268 aaPredicted RBP10.48□□□□□ -0.73
CHD3-210ENST00000479080 OR51J1Q9H342 316 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 TPSG1Q9NRR2 321 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 PLSCR3Q9NRY6 295 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 PRELID3BQ9Y3B1 194 aa10.48□□□□□ -0.73
CHD3-210ENST00000479080 F8P00451 2351 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 A0A0B4J2A0 478 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 A6NDX4 124 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 MPTX1A8MV57 137 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 CCSO14618 274 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 IGHV4-59P01825 116 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 APOA2P02652 100 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 CRYGBP07316 175 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 IL6RP08887 468 aaPredicted RBP10.47□□□□□ -0.73
CHD3-210ENST00000479080 FBP1P09467 338 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 S100GP29377 79 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 F2RL1P55085 397 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 CBX3Q13185 183 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 LRRC75BQ2VPJ9 315 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 TMEM268Q5VZI3 342 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 DHRS7BQ6IAN0 325 aaPredicted RBP10.47□□□□□ -0.73
CHD3-210ENST00000479080 CADM3Q8N126 398 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 C12orf45Q8N5I9 185 aaPredicted RBP10.47□□□□□ -0.73
CHD3-210ENST00000479080 TCTEX1D1Q8N7M0 179 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 SIGLECL1Q8N7X8 197 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 SSX3Q99909 188 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 PLEKHA2Q9HB19 425 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 SHPKQ9UHJ6 478 aa10.47□□□□□ -0.73
CHD3-210ENST00000479080 FN1P02751 2386 aaKnown RBP10.47□□□□□ -0.73
CHD3-210ENST00000479080 MXRA5Q9NR99 2828 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 H3BUX3 64 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 H7C2Y5 167 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 CREBL2O60519 120 aaPredicted RBP10.46□□□□□ -0.73
CHD3-210ENST00000479080 B3GALNT1O75752 331 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 HPRT1P00492 218 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 SAA1P0DJI8 122 aaPredicted RBP10.46□□□□□ -0.73
CHD3-210ENST00000479080 MC5RP33032 325 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 G6PCP35575 357 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 SRP14P37108 136 aaKnown RBP10.46□□□□□ -0.73
CHD3-210ENST00000479080 SSBP2P81877 361 aaPredicted RBP10.46□□□□□ -0.73
CHD3-210ENST00000479080 HNF4GQ14541 408 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 FCN2Q15485 313 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 NMSQ5H8A3 153 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 Q6YL49 198 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 Q6ZRM9 215 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms