RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CASQ2O14958 399 aaPredicted RBP10.08□□□□□ -0.8
VCL-205ENST00000478896 CRYGBP07316 175 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 CSN3P07498 182 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 FCGR3AP08637 254 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 GSTT2P0CG29 244 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 GSTT2BP0CG30 244 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 RRASP10301 218 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 PSMA1P25786 263 aaKnown RBP10.08□□□□□ -0.8
VCL-205ENST00000478896 EXOSC2Q13868 293 aaKnown RBP10.08□□□□□ -0.8
VCL-205ENST00000478896 C2orf76Q3KRA6 126 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 TMEM177Q53S58 311 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 HES5Q5TA89 166 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 IL34Q6ZMJ4 242 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 TMEM91Q6ZNR0 172 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 IDO2Q6ZQW0 420 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 DYNLRB2Q8TF09 96 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 SRSF12Q8WXF0 261 aaKnown RBP10.08□□□□□ -0.8
VCL-205ENST00000478896 MAFIPQ8WZ33 124 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 RAB3CQ96E17 227 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 PLEKHA3Q9HB20 300 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 V9GY05 133 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 TENM2Q9NT68 2774 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 STARD9Q9P2P6 4700 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 TNCP24821 2201 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 DYNC2H1Q8NCM8 4307 aaKnown RBP10.07□□□□□ -0.8
VCL-205ENST00000478896 TMEM272A0A1B0GTI8 110 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 SRRM4A7MD48 611 aaKnown RBP10.07□□□□□ -0.8
VCL-205ENST00000478896 JTBO76095 146 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 ACTL6BO94805 426 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 BRI3O95415 125 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 CRYZL1O95825 349 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 OR9G9P0C7N8 305 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 GADD45AP24522 165 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 CD81P60033 236 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 TPBGQ13641 420 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 ADAD2Q8NCV1 583 aaKnown RBP10.07□□□□□ -0.8
VCL-205ENST00000478896 OR2K2Q8NGT1 345 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 C5orf30Q96GV9 206 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 THAP7Q9BT49 309 aaPredicted RBP10.07□□□□□ -0.8
VCL-205ENST00000478896 CCDC90BQ9GZT6 254 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 RETNQ9HD89 108 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 SIGLEC8Q9NYZ4 499 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 RAB22AQ9UL26 194 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 TPRKBQ9Y3C4 175 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 CEPT1Q9Y6K0 416 aa10.07□□□□□ -0.8
VCL-205ENST00000478896 TRBV6-7A0A0A0MS04 114 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 AIREO43918 545 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 CREBL2O60519 120 aaPredicted RBP10.06□□□□□ -0.8
VCL-205ENST00000478896 TUSC2O75896 110 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 TPPPO94811 219 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 DIRAS3O95661 229 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 PRH1P02810 166 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 GNB3P16520 340 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 PSMD7P51665 324 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 UBE2KP61086 200 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 RHOGP84095 191 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 MLLT11Q13015 90 aaPredicted RBP10.06□□□□□ -0.8
VCL-205ENST00000478896 ARFRP1Q13795 201 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 IRF3Q14653 427 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 TEX45Q8NA69 505 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 FAM110AQ9BQ89 295 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 SLC2A8Q9NY64 477 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 ZNF230Q9UIE0 474 aaPredicted RBP10.06□□□□□ -0.8
VCL-205ENST00000478896 KCNK7Q9Y2U2 307 aa10.06□□□□□ -0.8
VCL-205ENST00000478896 LYSTQ99698 3801 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 ERICH4A6NGS2 130 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 RGS10O43665 173 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 RBMXL2O75526 392 aaKnown RBP10.05□□□□□ -0.8
VCL-205ENST00000478896 DUTP33316 252 aaKnown RBP10.05□□□□□ -0.8
VCL-205ENST00000478896 TALDO1P37837 337 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 FABP5Q01469 135 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 ATP5G2Q06055 141 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 PLA2G7Q13093 441 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 PRSS8Q16651 343 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
VCL-205ENST00000478896 OR10R2Q8NGX6 335 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 IL17DQ8TAD2 202 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
VCL-205ENST00000478896 NEURL2Q9BR09 285 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 DCUN1D5Q9BTE7 237 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 AKIP1Q9NQ31 210 aa10.05□□□□□ -0.8
VCL-205ENST00000478896 LINC00473A8K010 186 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 J3QRK9 145 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 BMPR1BO00238 502 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 MFNGO00587 321 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 PDCD5O14737 125 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 SAA1P0DJI8 122 aaPredicted RBP10.04□□□□□ -0.8
VCL-205ENST00000478896 HIST1H1DP16402 221 aaKnown RBP10.04□□□□□ -0.8
VCL-205ENST00000478896 LAX1Q8IWV1 398 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 DDB2Q92466 427 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 SPIN2AQ99865 258 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 SPIN2BQ9BPZ2 258 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 CENPOQ9BU64 300 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 ACOT13Q9NPJ3 140 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 SACSQ9NZJ4 4579 aa10.04□□□□□ -0.8
VCL-205ENST00000478896 METTL21EPA6NDL7 271 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms