RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 GRAMD2BQ96HH9 432 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 LYZL4Q96KX0 146 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 SIRT7Q9NRC8 400 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 ELOVL5Q9NYP7 299 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 FAM90A26D6RGX4 464 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 IFNL4K9M1U5 179 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 CLEC2AQ6UVW9 174 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 GGNQ86UU5 652 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 IL22RA2Q969J5 263 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 WASHC3Q9Y3C0 194 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 SIGLEC5O15389 551 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 SLC31A2O15432 143 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 CXorf1O96002 111 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 CD8AP01732 235 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 PAX6P26367 422 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 WNT5AP41221 380 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 VKORC1L1Q8N0U8 176 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 CYB561D1Q8N8Q1 229 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 OR10D4PQ8NGN7 298 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 CLDN16Q9Y5I7 305 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 IGKV3-7A0A075B6H7 116 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 PPIAL4CA0A0B4J2A2 164 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 PROB1E7EW31 1015 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 PPIAL4GP0DN37 164 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 BCL2P10415 239 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 RAB5AP20339 215 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 PMCHP20382 165 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 MMD2Q8IY49 270 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 GFI1Q99684 422 aa12.07□□□□□ -0.48
NPHP4-208ENST00000478423 ZNF729A6NN14 1252 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-208ENST00000478423 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 STXBP6Q8NFX7 210 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 PERPQ96FX8 193 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 FBLN5Q9UBX5 448 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 FOXD3Q9UJU5 478 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-208ENST00000478423 HELTA6NFD8 242 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 B9A039 149 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 H0YL77 283 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 MPDU1O75352 247 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 EIF3GO75821 320 aaKnown RBP eCLIP12.06□□□□□ -0.48
NPHP4-208ENST00000478423 CCL1P22362 96 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 BMI1P35226 326 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 PAQR4Q8N4S7 273 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-208ENST00000478423 FAM216AQ8WUB2 273 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 SLC25A28Q96A46 364 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 TMEM204Q9BSN7 226 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 SPRR3Q9UBC9 169 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 CEACAM18A8MTB9 384 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 Q0VFX4 171 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 GUCA2BQ16661 112 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 OR9G1Q8NH87 305 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 TCF19Q9Y242 345 aa12.06□□□□□ -0.48
NPHP4-208ENST00000478423 MSGN1A6NI15 193 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 BTCP35070 178 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 ZCCHC14Q8WYQ9 949 aaKnown RBP12.05□□□□□ -0.48
NPHP4-208ENST00000478423 LSM10Q969L4 123 aaKnown RBP12.05□□□□□ -0.48
NPHP4-208ENST00000478423 DCTN5Q9BTE1 182 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 KCNMB2Q9Y691 235 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 ZGRF1Q86YA3 2104 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 PQLC2LA1A4F0 135 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 CDK2AP1O14519 115 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 HTR1DP28221 377 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 RANP62826 216 aaKnown RBP12.05□□□□□ -0.48
NPHP4-208ENST00000478423 GTF3C1Q12789 2109 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 ZNF385CQ66K41 422 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-208ENST00000478423 VOPP1Q96AW1 172 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 CLEC5AQ9NY25 188 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 METTL1Q9UBP6 276 aaKnown RBP12.05□□□□□ -0.48
NPHP4-208ENST00000478423 B4DEV8 164 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 PDE6DO43924 150 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 FAM216BQ8N7L0 139 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 DPF1Q92782 380 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 RSRP1Q9BUV0 290 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 IGKV3D-15A0A087WSY6 115 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 APOBEC3AP31941 199 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-208ENST00000478423 BSPH1Q075Z2 132 aa12.05□□□□□ -0.48
NPHP4-208ENST00000478423 NOL4LQ96MY1 436 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-208ENST00000478423 LOC102723971A0A1B0GUV8 181 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 LINC00869P0C866 280 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 NHLRC3Q5JS37 347 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 LURAP1Q96LR2 239 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 SMDT1Q9H4I9 107 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 MPTX1A8MV57 137 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 KBTBD11O94819 623 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 MMP7P09237 267 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-208ENST00000478423 CRYGSP22914 178 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 ZNF788Q6ZQV5 615 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 RTBDNQ9BSG5 229 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-208ENST00000478423 PIEZO1Q92508 2521 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 IQCF6A8MYZ5 107 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 SS18L1O75177 396 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-208ENST00000478423 COL8A1P27658 744 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 TPPP2P59282 170 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 RPEL1Q2QD12 228 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 RPL39P5Q59GN2 51 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 FA2HQ7L5A8 372 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms