RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 PJVKQ0ZLH3 352 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 CDK10Q15131 360 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 ZNF562Q6V9R5 426 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 ETV3LQ6ZN32 361 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 KCTD9Q7L273 389 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 SNX29P2Q8IUI4 249 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 ZNF695Q8IW36 515 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 GPX8Q8TED1 209 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 SECTM1Q8WVN6 248 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 KLK15Q9H2R5 256 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 CCL28Q9NRJ3 127 aa12.19□□□□□ -0.46
HMGA1-206ENST00000478214 CRYGBP07316 175 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 RFX2P48378 723 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
HMGA1-206ENST00000478214 FXYD4P59646 89 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 EIF4EBP1Q13541 118 aaPredicted RBP12.18□□□□□ -0.46
HMGA1-206ENST00000478214 C19orf54Q5BKX5 351 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 OR2B11Q5JQS5 317 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 SAMD5Q5TGI4 173 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 PPP1R27Q86WC6 154 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 MINDY2Q8NBR6 621 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 WFDC9Q8NEX5 89 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 RAB2BQ8WUD1 216 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 GIMAP1Q8WWP7 306 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 GPHA2Q96T91 129 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 FAM103A1Q9BTL3 118 aaKnown RBP12.18□□□□□ -0.46
HMGA1-206ENST00000478214 TAS2R8Q9NYW2 309 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 EHFQ9NZC4 300 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 NUBP2Q9Y5Y2 271 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 DNAH3Q8TD57 4116 aa12.18□□□□□ -0.46
HMGA1-206ENST00000478214 ARPC1BO15143 372 aaKnown RBP12.17□□□□□ -0.46
HMGA1-206ENST00000478214 SOX15O60248 233 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 FCGR3BO75015 233 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 IGLV1-40P01703 118 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 PMP2P02689 132 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 CD33P20138 364 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
HMGA1-206ENST00000478214 TMBIM6P55061 237 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 GNB1P62873 340 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 SSBP2P81877 361 aaPredicted RBP12.17□□□□□ -0.46
HMGA1-206ENST00000478214 OXLD1Q5BKU9 147 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 OVCH2Q7RTZ1 564 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 LYSMD2Q8IV50 215 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 MFSD4AQ8N468 514 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 GRPEL2Q8TAA5 225 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 TCTEX1D2Q8WW35 142 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 SLC5A7Q9GZV3 580 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 SCPEP1Q9HB40 452 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 PRELID3BQ9Y3B1 194 aa12.17□□□□□ -0.46
HMGA1-206ENST00000478214 A0A1W2PN81 502 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 TNFSF12O43508 249 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 HLA-DMAP28067 261 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 SLC6A1P30531 599 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 CHRNA7P36544 502 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 TAS2R46P59540 309 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 DYRK1AQ13627 763 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 FXYD3Q14802 87 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 DEFB136Q30KP8 78 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 TMEM65Q6PI78 240 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 IDO2Q6ZQW0 420 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 TMEM17Q86X19 198 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 MRPL41Q8IXM3 137 aaKnown RBP12.16□□□□□ -0.46
HMGA1-206ENST00000478214 LINC00482Q8N8I6 264 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 LFNGQ8NES3 379 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 OR5H2Q8NGV7 314 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 OSR1Q8TAX0 266 aaPredicted RBP12.16□□□□□ -0.46
HMGA1-206ENST00000478214 MYOZ3Q8TDC0 251 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 CASTOR1Q8WTX7 329 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 ARPC1AQ92747 370 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 DUX3Q96PT4 197 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 HSD17B10Q99714 261 aaKnown RBP12.16□□□□□ -0.46
HMGA1-206ENST00000478214 DCUN1D5Q9BTE7 237 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 MIXL1Q9H2W2 232 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 EXTL2Q9UBQ6 330 aa12.16□□□□□ -0.46
HMGA1-206ENST00000478214 CTDSP2O14595 271 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 CNIH1O95406 144 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 IGLL1P15814 213 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 HRH1P35367 487 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 MYCNOSP40205 109 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 RAB9AP51151 201 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 BRWD1-AS2P59051 145 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 UBE2KP61086 200 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 HERV-K104P61576 105 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 TMEM267Q0VDI3 215 aaPredicted RBP12.15□□□□□ -0.46
HMGA1-206ENST00000478214 KIAA0141Q14154 515 aaPredicted RBP12.15□□□□□ -0.46
HMGA1-206ENST00000478214 MSMO1Q15800 293 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 MRGPRG-AS1Q2M3A8 158 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 VMA21Q3ZAQ7 101 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 AKIRIN2Q53H80 203 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 RNASE12Q5GAN4 147 aaKnown RBP12.15□□□□□ -0.46
HMGA1-206ENST00000478214 UNQ5815/PRO19632Q6UWF5 114 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 DHRS11Q6UWP2 260 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 ZNF66Q6ZN08 573 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 TEX45Q8NA69 505 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 RAX2Q96IS3 184 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 P2RX4Q99571 388 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 BCL7BQ9BQE9 202 aa12.15□□□□□ -0.46
HMGA1-206ENST00000478214 ZNF2Q9BSG1 426 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms