RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 MED21Q13503 144 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 ZNF124Q15973 351 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 FAM98BQ52LJ0 330 aaKnown RBP5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 RAB12Q6IQ22 244 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 UNQ9165/PRO28630Q6UXU0 137 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 ZNF367Q7RTV3 350 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 FAM220AQ7Z4H9 259 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 PDPNQ86YL7 162 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 GID4Q8IVV7 300 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 TTC9CQ8N5M4 171 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 OR13C5Q8NGS8 318 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 MRPL30Q8TCC3 161 aaKnown RBP5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 CD300LFQ8TDQ1 290 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 RAB24Q969Q5 203 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 ASB9Q96DX5 294 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 IL4I1Q96RQ9 567 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 PHB2Q99623 299 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 LRRC42Q9Y546 428 aa5.28□□□□□ -1.56
SPTLC1-205ENST00000477888 ITGB1BP1O14713 200 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 ZNF780AO75290 641 aaPredicted RBP5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 OR2J3O76001 311 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 IFNA21P01568 189 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 IFNA17P01571 189 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 HTR1AP08908 422 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 PRDX6P30041 224 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 ARL3P36405 182 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 TMEM187Q14656 261 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 HMGN3Q15651 99 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 C12orf74Q32Q52 190 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 SIGIRRQ6IA17 410 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 C16orf54Q6UWD8 224 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 CLEC19AQ6UXS0 136 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 SPATA12Q7Z6I5 190 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 SVOPQ8N4V2 548 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 SRSF12Q8WXF0 261 aaKnown RBP5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 OR14A2Q96R54 314 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 C6orf62Q9GZU0 229 aaPredicted RBP5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 PAK1IP1Q9NWT1 392 aaPredicted RBP5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 STEAP1Q9UHE8 339 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 PEX16Q9Y5Y5 336 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 U3KQE9 123 aa5.27□□□□□ -1.57
SPTLC1-205ENST00000477888 IGHV4-28A0A0C4DH34 117 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 UBE2QL1A1L167 161 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 IGHV3-23P01764 117 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 GLAP06280 429 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 RAP2AP10114 183 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 FUT3P21217 361 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 GALP22466 123 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 ZNF93P35789 620 aaPredicted RBP5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 ATP6V1E1P36543 226 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 CAPGP40121 348 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 ELLP55199 621 aaPredicted RBP5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 PRSS8Q16651 343 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 RNF212Q495C1 297 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 SLC22A6Q4U2R8 563 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 C12orf73Q69YU5 71 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 LYPD1Q8N2G4 141 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 NSL1Q96IY1 281 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 PRRG3Q9BZD7 231 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 C11orf54Q9H0W9 315 aaPredicted RBP5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 ISG20L2Q9H9L3 353 aaKnown RBP5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 ARL8BQ9NVJ2 186 aa5.26□□□□□ -1.57
SPTLC1-205ENST00000477888 OR4C46A6NHA9 309 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 C15orf61A6NNL5 157 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 ZAR1LA6NP61 321 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 J3QRE1 110 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 GNGT2O14610 69 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 MPPED1O15442 326 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 BAG2O95816 211 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 CA1P00915 261 aaPredicted RBP5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 CLEC3BP05452 202 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 RPSAP08865 295 aaKnown RBP5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 GIG44P09565 113 aaPredicted RBP5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 MIFP14174 115 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 MALP21145 153 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 PSMB6P28072 239 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 DAPP51397 102 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 KRTAP10-2P60368 255 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 MS4A2Q01362 244 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 TMED1Q13445 227 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 KLK9Q2XQG4 91 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 Q5VSD8 79 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 GLT8D1Q68CQ7 371 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 LAMTOR1Q6IAA8 161 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 ZNF767PQ75MW2 155 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 DHFR2Q86XF0 187 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 UBE2DNLQ8IWF7 75 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 TEX45Q8NA69 505 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 IL1F10Q8WWZ1 152 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 S100A13Q99584 98 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 PDCD1LG2Q9BQ51 273 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 RIBC2Q9H4K1 309 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 TMEM138Q9NPI0 162 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 TAS2R4Q9NYW5 299 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 KLK9Q9UKQ9 250 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 UFC1Q9Y3C8 167 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 S4R3C0 116 aa5.25□□□□□ -1.57
SPTLC1-205ENST00000477888 AQP12BA6NM10 295 aa5.24□□□□□ -1.57
SPTLC1-205ENST00000477888 J3QLW9 94 aa5.24□□□□□ -1.57
SPTLC1-205ENST00000477888 FAM107AO95990 144 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms