RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 FOXRED2Q8IWF2 684 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 STPG2Q8N412 459 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 PRR18Q8N4B5 295 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 OR13A1Q8NGR1 328 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 MRGPRDQ8TDS7 321 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 IL1F10Q8WWZ1 152 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 KIRREL1Q96J84 757 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 ZNF714Q96N38 554 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 GINS4Q9BRT9 223 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 CABLES2Q9BTV7 478 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 CLEC7AQ9BXN2 247 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 TAF9BQ9HBM6 251 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 RAB9BQ9NP90 201 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 NUDT15Q9NV35 164 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 DPM3Q9P2X0 92 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 FAT2Q9NYQ8 4349 aa7.54□□□□□ -1.2
SMARCB1-206ENST00000477836 hADV38S2A0JD32 116 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 C12orf77C9JDV5 145 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 SDCBPO00560 298 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 BET1O15155 118 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 SPINT2O43291 252 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 DIRAS3O95661 229 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 SCTP09683 121 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 CTXN2P0C2S0 81 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 ZNF735P0CB33 412 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 GSTT2P0CG29 244 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 CNTFRP26992 372 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 SSTR5P35346 364 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 HERV-K104P61576 105 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 MEF2CQ06413 473 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 SLC35E3Q7Z769 313 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 SGPP2Q8IWX5 399 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 ZNF565Q8N9K5 539 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 OR6F1Q8NGZ6 308 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 CREB3L1Q96BA8 519 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 SLC25A21Q9BQT8 299 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 C20orf85Q9H1P6 137 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 TMEM133Q9H2Q1 129 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 GAL3ST2Q9H3Q3 398 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 NCOR1P1Q9H4R4 102 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 RETNQ9HD89 108 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 CALYQ9NYX4 217 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 NUBP2Q9Y5Y2 271 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 SESN1Q9Y6P5 492 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 DNAH2Q9P225 4427 aa7.53□□□□□ -1.2
SMARCB1-206ENST00000477836 DNAH6Q9C0G6 4158 aa7.52□□□□□ -1.2
SMARCB1-206ENST00000477836 IGKV1-6A0A0C4DH72 117 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 LINC01548A6NM66 108 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 A8MZ25 164 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 NPIPB11E5RHQ5 1161 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 HSPA12AO43301 675 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 HBZP02008 142 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 TCRBP04435 133 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 OR8U8P0C7N1 319 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 FAM106CPP0CH98 169 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 TMEM30BQ3MIR4 351 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 IGSF11Q5DX21 431 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 TCF23Q7RTU1 214 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 C5orf56Q8N8D9 126 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 DUSP18Q8NEJ0 188 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 OR10J5Q8NHC4 309 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 UBALD1Q8TB05 177 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 C4orf3Q8WVX3 66 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 ARL11Q969Q4 196 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 GALMQ96C23 342 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 FAM110AQ9BQ89 295 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 ZNF2Q9BSG1 426 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 KIAA1456Q9P272 454 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 SLC23A1Q9UHI7 598 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 UBE2J1Q9Y385 318 aaPredicted RBP7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 LINC00312Q9Y6C7 94 aa7.52□□□□□ -1.21
SMARCB1-206ENST00000477836 TRAV6A0A075B6T7 132 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 TRBV6-7A0A0A0MS04 114 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 FAM172BPA6NC97 362 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 ZNF729A6NN14 1252 aaPredicted RBP7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 LEUTXA8MZ59 168 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 ARPC1BO15143 372 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 DEDDO75618 318 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 IGHG2P01859 326 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 GZMHP20718 246 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 ZBTB25P24278 435 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 FCGR2CP31995 323 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 FXYD4P59646 89 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 TMED4Q7Z7H5 227 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 LHFPL1Q86WI0 220 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 Q8N1Y9 231 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 ABHD12Q8N2K0 398 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 OR13C8Q8NGS7 320 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 OR1L1Q8NH94 360 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 TERB2Q8NHR7 220 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 DCUN1D4Q92564 292 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 TOMM40LQ969M1 308 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 FXYD6Q9H0Q3 95 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 OR1A1Q9P1Q5 309 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 GNG12Q9UBI6 72 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 JPT1Q9UK76 154 aa7.51□□□□□ -1.21
SMARCB1-206ENST00000477836 hCG_2014768A0A024R1R8 64 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 KBTBD11-OT1A0A1B0GTJ5 212 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 INMT-MINDY4F8WBC2 141 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 C15orf65H3BRN8 121 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms