RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 H7C2Y5 167 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 SPINT2O43291 252 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 ORC5O43913 435 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 FADS2O95864 444 aaKnown RBP4.4□□□□□ -1.71
LINC00173-202ENST00000477702 HBZP02008 142 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 MT-ND4P03905 459 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 PRDX6P30041 224 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 PPP1CCP36873 323 aaKnown RBP4.4□□□□□ -1.71
LINC00173-202ENST00000477702 RFX2P48378 723 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 KCNJ3P48549 501 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 ADARB1P78563 741 aaKnown RBP4.4□□□□□ -1.71
LINC00173-202ENST00000477702 PAX5Q02548 391 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 PJVKQ0ZLH3 352 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 RIPK1Q13546 671 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 PSG5Q15238 335 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 TBCEQ15813 527 aaPredicted RBP4.4□□□□□ -1.71
LINC00173-202ENST00000477702 MICAQ29983 383 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 SLC35D3Q5M8T2 416 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 Q5VSD8 79 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 ZNF767PQ75MW2 155 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 UTS2BQ765I0 119 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 SLC35F2Q8IXU6 374 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 SAXO1Q8IYX7 474 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 PRSS35Q8N3Z0 413 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 KCNG3Q8TAE7 436 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 NEK7Q8TDX7 302 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 FAM46BQ96A09 425 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 SPSB1Q96BD6 273 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 MRPS24Q96EL2 167 aaKnown RBP4.4□□□□□ -1.71
LINC00173-202ENST00000477702 CNN2Q99439 309 aaKnown RBP4.4□□□□□ -1.71
LINC00173-202ENST00000477702 NIPSNAP1Q9BPW8 284 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 CHRDL1Q9BU40 450 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 MDFICQ9P1T7 246 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 AASSQ9UDR5 926 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 ZNF230Q9UIE0 474 aaPredicted RBP4.4□□□□□ -1.71
LINC00173-202ENST00000477702 TMEM14AQ9Y6G1 99 aa4.4□□□□□ -1.71
LINC00173-202ENST00000477702 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 TMEM213A2RRL7 107 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 MPTX1A8MV57 137 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 AIPO00170 330 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 AMBPP02760 352 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 SAA2P0DJI9 122 aaPredicted RBP4.39□□□□□ -1.71
LINC00173-202ENST00000477702 DBTP11182 482 aaKnown RBP4.39□□□□□ -1.71
LINC00173-202ENST00000477702 LGALS7P47929 136 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 ACTR3P61158 418 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 RHOGP84095 191 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 ATP5G2Q06055 141 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 MED22Q15528 200 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 Q3ZCU0 254 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 MORN2Q502X0 79 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 TMEM236Q5W0B7 351 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 LPCAT4Q643R3 524 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 RBPMS2Q6ZRY4 209 aaKnown RBP4.39□□□□□ -1.71
LINC00173-202ENST00000477702 ZNF833PQ6ZTB9 187 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 SSX6Q7RTT6 188 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 APRG1Q8IVJ8 170 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 SLC38A6Q8IZM9 456 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 OR4K15Q8NH41 348 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 TBX5Q99593 518 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 CSTL1Q9H114 145 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 REEP1Q9H902 201 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 ZNF556Q9HAH1 456 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 RHOFQ9HBH0 211 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 MED4Q9NPJ6 270 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 OR2S2Q9NQN1 319 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 RCC2Q9P258 522 aaKnown RBP4.39□□□□□ -1.71
LINC00173-202ENST00000477702 ABCD2Q9UBJ2 740 aa4.39□□□□□ -1.71
LINC00173-202ENST00000477702 DEFB131BA0A096LNP1 70 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.38□□□□□ -1.71
LINC00173-202ENST00000477702 ZNF670-ZNF695F2Z2N8 137 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 GNGT2O14610 69 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 SLC22A1O15245 554 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 OR7C1O76099 320 aaPredicted RBP4.38□□□□□ -1.71
LINC00173-202ENST00000477702 IFNA21P01568 189 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 IFNA17P01571 189 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 IGHV3-23P01764 117 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 HMGN1P05114 100 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 KRT8P05787 483 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 SCTP09683 121 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 CT45A6P0DMU7 189 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 CT45A5P0DMU8 189 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 CT45A7P0DMV0 189 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 HSD17B1P14061 328 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 HOXB6P17509 224 aaKnown RBP4.38□□□□□ -1.71
LINC00173-202ENST00000477702 RCC1P18754 421 aaPredicted RBP4.38□□□□□ -1.71
LINC00173-202ENST00000477702 GK3PQ14409 553 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 KISS1Q15726 138 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 FAM98BQ52LJ0 330 aaKnown RBP4.38□□□□□ -1.71
LINC00173-202ENST00000477702 RPL39P5Q59GN2 51 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 C6orf141Q5SZD1 244 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 ATAD3CQ5T2N8 411 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 SYT6Q5T7P8 510 aaPredicted RBP4.38□□□□□ -1.71
LINC00173-202ENST00000477702 ELP2Q6IA86 826 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 ZNF497Q6ZNH5 498 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 TMEM163Q8TC26 289 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 CD300LFQ8TDQ1 290 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 GHSRQ92847 366 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 C10orf35Q96D05 121 aa4.38□□□□□ -1.71
LINC00173-202ENST00000477702 GALNT14Q96FL9 552 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms