RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 VAT1Q99536 393 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 TBX5Q99593 518 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 PHB2Q99623 299 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 AIF1LQ9BQI0 150 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 MED18Q9BUE0 208 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SLC19A3Q9BZV2 496 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 POMKQ9H5K3 350 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 FAIMQ9NVQ4 179 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR5V1Q9UGF6 321 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SS18L2Q9UHA2 77 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR52A1Q9UKL2 312 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 HHLA2Q9UM44 414 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR51B4Q9Y5P0 310 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 AKAP11Q9UKA4 1901 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 DICER1Q9UPY3 1922 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 DOCK3Q8IZD9 2030 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 NUP153P49790 1475 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 XIRP1Q702N8 1843 aaKnown RBP1.17□□□□□ -2.22
VPS50-213ENST00000477572 MYH7P12883 1935 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 ADAMTS7Q9UKP4 1686 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 C9orf84Q5VXU9 1444 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 CD109Q6YHK3 1445 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 OR6C6A6NF89 314 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 H3BP45 60 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 K7EP13 123 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 GPR31O00270 319 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 UPK2O00526 184 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 CDIPTO14735 213 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 PHYHO14832 338 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 PFDN6O15212 129 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 OR2J2O76002 312 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 S1PR2O95136 353 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 RAB36O95755 333 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 RBP1P09455 135 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 SMIM6P0DI80 62 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 COX4I1P13073 169 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 PVALBP20472 110 aaPredicted RBP1.17□□□□□ -2.22
VPS50-213ENST00000477572 OGNP20774 298 aaKnown RBP1.17□□□□□ -2.22
VPS50-213ENST00000477572 F8A1P23610 371 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 RCVRNP35243 200 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 STC1P52823 247 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 TCL1AP56279 114 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 DNAJB13P59910 316 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 GNG3P63215 75 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 HPCAP84074 193 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 POU6F1Q14863 301 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 GUSBP1Q15486 140 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 SPA17Q15506 151 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 TRAM1Q15629 374 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 C4orf26Q17RF5 130 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 TBC1D28Q2M2D7 210 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 LRRC75BQ2VPJ9 315 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 CEACAM16Q2WEN9 425 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 SMIM21Q3B7S5 101 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 Q499Y3 187 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 CLEC12AQ5QGZ9 265 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 OGFRL1Q5TC84 451 aaPredicted RBP1.17□□□□□ -2.22
VPS50-213ENST00000477572 NXNL2Q5VZ03 156 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 NOXRED1Q6NXP6 359 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 ZNF322Q6U7Q0 402 aaPredicted RBP1.17□□□□□ -2.22
VPS50-213ENST00000477572 OLIG3Q7RTU3 272 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 LYZL2Q7Z4W2 148 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 GAPTQ8N292 157 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 GPR32P1Q8NGA4 272 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 CD200R1Q8TD46 325 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 HAVCR2Q8TDQ0 301 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 CASTOR1Q8WTX7 329 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 C11orf40Q8WZ69 217 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 SMIM12Q96EX1 92 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 C14orf144Q96I85 54 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 GGACTQ9BVM4 153 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 KIFC1Q9BW19 673 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 TSSK6Q9BXA6 273 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 PECRQ9BY49 303 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 NXF2Q9GZY0 626 aaKnown RBP1.17□□□□□ -2.22
VPS50-213ENST00000477572 MIXL1Q9H2W2 232 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 BOLA2Q9H3K6 86 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 METTL17Q9H7H0 456 aaPredicted RBP1.17□□□□□ -2.22
VPS50-213ENST00000477572 TMEM106BQ9NUM4 274 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 GLTPQ9NZD2 209 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 FBXO5Q9UKT4 447 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 SLC35A3Q9Y2D2 325 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 UFC1Q9Y3C8 167 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 MYH11P35749 1972 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 PHLPP1O60346 1717 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 RAPGEF2Q9Y4G8 1499 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 NCKAP5O14513 1909 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 RB1CC1Q8TDY2 1594 aa1.17□□□□□ -2.22
VPS50-213ENST00000477572 SOGA1O94964 1423 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 WRNQ14191 1432 aaPredicted RBP eCLIP1.16□□□□□ -2.22
VPS50-213ENST00000477572 PVALEFA0A1B0GWK0 134 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 PRORSD1PA6NEY8 169 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CCDC160A6NGH7 325 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CLDN24A6NM45 220 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CD300LBA8K4G0 201 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 EVPLLA8MZ36 301 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 BHLHE40O14503 412 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 DCTN3O75935 186 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 MT-CO2P00403 227 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 IGF2P01344 180 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms