RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 OR2F2O95006 317 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 KIR2DS2P43631 304 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 RND3P61587 244 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 IFITM3Q01628 133 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 TAGLNQ01995 201 aaKnown RBP12.25□□□□□ -0.45
SEC13-215ENST00000477547 EBI3Q14213 229 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 CCBE1Q6UXH8 406 aaPredicted RBP12.25□□□□□ -0.45
SEC13-215ENST00000477547 TBC1D26Q86UD7 250 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 OR4S2Q8NH73 311 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 SCGB3A2Q96PL1 93 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 RAB18Q9NP72 206 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 COPZ2Q9P299 210 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 VSIG4Q9Y279 399 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 MOB4Q9Y3A3 225 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 TRIM77I1YAP6 450 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 KCNAB3O43448 404 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 CRYZL1O95825 349 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 IGKV1-16P04430 117 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 RRASP10301 218 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 MMDQ15546 238 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 DHRS7BQ6IAN0 325 aaPredicted RBP12.24□□□□□ -0.45
SEC13-215ENST00000477547 MZT2BQ6NZ67 158 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 C16orf82Q7Z2V1 217 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 Q8N6K4 173 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 POC5Q8NA72 575 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 RBM14Q96PK6 669 aaKnown RBP12.24□□□□□ -0.45
SEC13-215ENST00000477547 SLC25A21Q9BQT8 299 aaPredicted RBP12.24□□□□□ -0.45
SEC13-215ENST00000477547 C5orf66Q9H5L9 145 aa12.24□□□□□ -0.45
SEC13-215ENST00000477547 PEX14O75381 377 aa12.23□□□□□ -0.45
SEC13-215ENST00000477547 NDUFB6O95139 128 aa12.23□□□□□ -0.45
SEC13-215ENST00000477547 DEFA1P59665 94 aa12.23□□□□□ -0.45
SEC13-215ENST00000477547 DEFA3P59666 94 aa12.23□□□□□ -0.45
SEC13-215ENST00000477547 TMED4Q7Z7H5 227 aa12.23□□□□□ -0.45
SEC13-215ENST00000477547 SPAG16Q8N0X2 631 aa12.23□□□□□ -0.45
SEC13-215ENST00000477547 OR4C13Q8NGP0 309 aa12.23□□□□□ -0.45
SEC13-215ENST00000477547 FLYWCH2Q96CP2 140 aaKnown RBP12.23□□□□□ -0.45
SEC13-215ENST00000477547 GPR132Q9UNW8 380 aa12.23□□□□□ -0.45
SEC13-215ENST00000477547 FAM181BA6NEQ2 426 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 SHOXO15266 292 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 MPPED1O15442 326 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 NBR2O15453 112 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 RAMP3O60896 148 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 F2RP25116 425 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 CNTFRP26992 372 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
SEC13-215ENST00000477547 CENPSQ8N2Z9 138 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 OR8H1Q8NGG4 311 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 ENKURQ8TC29 256 aa12.22□□□□□ -0.45
SEC13-215ENST00000477547 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
SEC13-215ENST00000477547 TEX13DA0A0J9YY54 714 aaPredicted RBP12.21□□□□□ -0.45
SEC13-215ENST00000477547 NCBP2LA6PVI3 153 aaKnown RBP12.21□□□□□ -0.45
SEC13-215ENST00000477547 H0Y980 276 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 ARPC1BO15143 372 aaKnown RBP12.21□□□□□ -0.45
SEC13-215ENST00000477547 RBFOX2O43251 390 aaKnown RBP eCLIP12.21□□□□□ -0.45
SEC13-215ENST00000477547 SPDEFO95238 335 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 SLC6A1P30531 599 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 RPL15P61313 204 aaKnown RBP12.21□□□□□ -0.45
SEC13-215ENST00000477547 TMEM177Q53S58 311 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 ADAD2Q8NCV1 583 aaKnown RBP12.21□□□□□ -0.45
SEC13-215ENST00000477547 OSR1Q8TAX0 266 aaPredicted RBP12.21□□□□□ -0.45
SEC13-215ENST00000477547 TMEM230Q96A57 120 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 RITA1Q96K30 269 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 TSNAXQ99598 290 aaKnown RBP12.21□□□□□ -0.45
SEC13-215ENST00000477547 NPFFR1Q9GZQ6 430 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 C20orf85Q9H1P6 137 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 NAA60Q9H7X0 242 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 PALMDQ9NP74 551 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 C1RLQ9NZP8 487 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 KIAA1456Q9P272 454 aa12.21□□□□□ -0.45
SEC13-215ENST00000477547 FAM240BA0A1B0GVZ2 78 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 CRYM-AS1A6NIL9 109 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 M0QZK8 103 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 FGF16O43320 207 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 S1PR2O95136 353 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 CRYBA1P05813 215 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 AKR1C4P17516 323 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 BRWD1-AS2P59051 145 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 TAS2R31P59538 309 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 TCTEX1D1Q8N7M0 179 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 C5orf56Q8N8D9 126 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 TP53RKQ96S44 253 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 RNF5Q99942 180 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 COMMD9Q9P000 198 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 PLXNB1O43157 2135 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 MEGF8Q7Z7M0 2845 aa12.2□□□□□ -0.46
SEC13-215ENST00000477547 C3orf85A0A1B0GTC6 90 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 SLC25A17O43808 307 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 NDUFA3O95167 84 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 OR5AC1P0C628 307 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 VSIG10L2P0DP72 767 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 F2RL1P55085 397 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
SEC13-215ENST00000477547 PLGLAQ15195 96 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 SGPP2Q8IWX5 399 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 FAM71E2Q8N5Q1 922 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 Q8N9W7 124 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 ZFAND2BQ8WV99 257 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms