RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 WFDC12Q8WWY7 111 aa10.42□□□□□ -0.74
TOP3A-205ENST00000477508 DEDD2Q8WXF8 326 aa10.42□□□□□ -0.74
TOP3A-205ENST00000477508 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
TOP3A-205ENST00000477508 AIFM2Q9BRQ8 373 aa10.42□□□□□ -0.74
TOP3A-205ENST00000477508 THAP7Q9BT49 309 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-205ENST00000477508 SERTAD4Q9NUC0 356 aa10.42□□□□□ -0.74
TOP3A-205ENST00000477508 V9GYH0 126 aa10.42□□□□□ -0.74
TOP3A-205ENST00000477508 TENM1Q9UKZ4 2725 aa10.42□□□□□ -0.74
TOP3A-205ENST00000477508 ANKRD20A5PA0PJZ0 165 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 LINC00473A8K010 186 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 DISC1C4P0D8 188 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 M0QYG6 137 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 SHOXO15266 292 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 HLA-DRB1P01911 266 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 ECI1P42126 302 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 LINC00205P59089 165 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 EIF4EBP1Q13541 118 aaPredicted RBP10.41□□□□□ -0.74
TOP3A-205ENST00000477508 PLGLAQ15195 96 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 LIN54Q6MZP7 749 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 Q6ZS46 218 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 SLC35E3Q7Z769 313 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 SLC38A6Q8IZM9 456 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 GDPD1Q8N9F7 314 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 POC5Q8NA72 575 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 OR4S2Q8NH73 311 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 TCTEX1D2Q8WW35 142 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 RITA1Q96K30 269 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 GON7Q9BXV9 100 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 TINAGL1Q9GZM7 467 aaPredicted RBP10.41□□□□□ -0.74
TOP3A-205ENST00000477508 WNT10AQ9GZT5 417 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 SIGLEC9Q9Y336 463 aa10.41□□□□□ -0.74
TOP3A-205ENST00000477508 AP4M1O00189 453 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 GPR31O00270 319 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 RBFOX2O43251 390 aaKnown RBP eCLIP10.4□□□□□ -0.74
TOP3A-205ENST00000477508 FCGR3BO75015 233 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 CRYZL1O95825 349 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 FAUP35544 74 aaKnown RBP10.4□□□□□ -0.74
TOP3A-205ENST00000477508 RPL30P62888 115 aaKnown RBP10.4□□□□□ -0.74
TOP3A-205ENST00000477508 ZNF45Q02386 682 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 PSG5Q15238 335 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 ZNF79Q15937 498 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 AADACL3Q5VUY0 350 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 ZNF818PQ6ZRF7 136 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 CENPVQ7Z7K6 275 aaPredicted RBP10.4□□□□□ -0.74
TOP3A-205ENST00000477508 LHFPL1Q86WI0 220 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 KLHDC1Q8N7A1 406 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 TCTEX1D1Q8N7M0 179 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 TERB2Q8NHR7 220 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 ZNF486Q96H40 463 aaPredicted RBP10.4□□□□□ -0.74
TOP3A-205ENST00000477508 HARBI1Q96MB7 349 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 PRRT1Q99946 306 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 FXYD6Q9H0Q3 95 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 ZNF580Q9UK33 172 aa10.4□□□□□ -0.74
TOP3A-205ENST00000477508 VSIG10L2P0DP72 767 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 CNTFRP26992 372 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 CNPY1Q3B7I2 92 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 VMA21Q3ZAQ7 101 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 ZFAND1Q8TCF1 268 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 CHPT1Q8WUD6 406 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 RSRP1Q9BUV0 290 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 METTL1Q9UBP6 276 aaKnown RBP10.39□□□□□ -0.75
TOP3A-205ENST00000477508 ANK2Q01484 3957 aa10.39□□□□□ -0.75
TOP3A-205ENST00000477508 SH2D7A6NKC9 451 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-205ENST00000477508 TNFSF12O43508 249 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 SLC25A17O43808 307 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 CREBL2O60519 120 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-205ENST00000477508 PGLYRP1O75594 196 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-205ENST00000477508 HRASP01112 189 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 PGAM2P15259 253 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 UBE2KP61086 200 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 SLC35B1P78383 322 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 SCGB2B2Q4G0G5 96 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 PPP1R27Q86WC6 154 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 SPAG16Q8N0X2 631 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 TOMM5Q8N4H5 51 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 TEX45Q8NA69 505 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 OR4D10Q8NGI6 311 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 OR4C16Q8NGL9 310 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 VSTM2AQ8TAG5 236 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 SCGB3A2Q96PL1 93 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 CITED1Q99966 193 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 SRRQ9GZT4 340 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 FAM212BQ9NTI7 297 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-205ENST00000477508 SLC2A8Q9NY64 477 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 PTTG2Q9NZH5 202 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 SCP2D1Q9UJQ7 156 aa10.38□□□□□ -0.75
TOP3A-205ENST00000477508 IGF1P05019 195 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 ZNF735P0CB33 412 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 F2RP25116 425 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 INPP1P49441 399 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 RND3P61587 244 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 SURF2Q15527 256 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-205ENST00000477508 TMEM95Q3KNT9 176 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 OR2B11Q5JQS5 317 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 ZNF562Q6V9R5 426 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 COMMD1Q8N668 190 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 TRIM63Q969Q1 353 aa10.37□□□□□ -0.75
TOP3A-205ENST00000477508 OR51J1Q9H342 316 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms