RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TSPOP30536 169 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 RSPO4Q2I0M5 234 aaPredicted RBP15.94■□□□□ 0.14
VARS2-209ENST00000477288 TMEM252Q8N6L7 170 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 TRIP11Q15643 1979 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 IGHV3OR16-13A0A075B7E8 117 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 IGHV3-74A0A0B4J1X5 117 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 HIST1H1AQ02539 215 aaPredicted RBP15.94■□□□□ 0.14
VARS2-209ENST00000477288 PEAR1Q5VY43 1037 aaPredicted RBP15.94■□□□□ 0.14
VARS2-209ENST00000477288 FOXJ2Q9P0K8 574 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 PILRAQ9UKJ1 303 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 PGLYRP1O75594 196 aaPredicted RBP15.94■□□□□ 0.14
VARS2-209ENST00000477288 RELQ04864 619 aaPredicted RBP15.94■□□□□ 0.14
VARS2-209ENST00000477288 COPS9Q8WXC6 57 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 SLC25A47Q6Q0C1 308 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 SRXN1Q9BYN0 137 aa15.94■□□□□ 0.14
VARS2-209ENST00000477288 TRGC2P03986 189 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 ISG15P05161 165 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 VKORC1L1Q8N0U8 176 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 EEF1AKMT3Q96AZ1 226 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 IGHV3-66A0A0C4DH42 116 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 VSIG10L2P0DP72 767 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 ANKRD31Q8N7Z5 1873 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 TRAV30A0A087WSZ9 112 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 LOC101059948A0A1B0GTJ6 334 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 K7ERU9 68 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 LIPFP07098 398 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 SNRPD3P62318 126 aaKnown RBP15.93■□□□□ 0.14
VARS2-209ENST00000477288 LHFPL5Q8TAF8 219 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 CLEC7AQ9BXN2 247 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 SCN3AQ9NY46 2000 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 SYNGR3O43761 229 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 ARL14EPLP0DKL9 152 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 RPS20P60866 119 aaKnown RBP15.93■□□□□ 0.14
VARS2-209ENST00000477288 TMEM222Q9H0R3 208 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 DNAJC4Q9NNZ3 241 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 ATG2BQ96BY7 2078 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 TRBV5-3A0A0A0MS03 114 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 FOXH1O75593 365 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 C1QL1O75973 258 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 NPPCP23582 126 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 FCARP24071 287 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 ZNF345Q14585 488 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 FGFRL1Q8N441 504 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 OR4C13Q8NGP0 309 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 TMEM45BQ96B21 275 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 GPR146Q96CH1 333 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 OR51M1Q9H341 326 aa15.93■□□□□ 0.14
VARS2-209ENST00000477288 TRIP12Q14669 1992 aaPredicted RBP15.92■□□□□ 0.14
VARS2-209ENST00000477288 PARLQ9H300 379 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 TUBD1Q9UJT1 453 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 SIRT4Q9Y6E7 314 aaPredicted RBP15.92■□□□□ 0.14
VARS2-209ENST00000477288 PRSS23O95084 383 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 DLL3Q9NYJ7 618 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 C17orf51A8MQB3 221 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 FOXI3A8MTJ6 420 aaPredicted RBP15.92■□□□□ 0.14
VARS2-209ENST00000477288 DNAL4O96015 105 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 TTC32Q5I0X7 151 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 FAM159AQ6UWV7 190 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 DMRTA2Q96SC8 542 aa15.92■□□□□ 0.14
VARS2-209ENST00000477288 MT-ND6P03923 174 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 OR4D5Q8NGN0 318 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 OR9G1Q8NH87 305 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 FOXC2Q99958 501 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 TMEM74BQ9NUR3 256 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 SIGLEC5O15389 551 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 TSPAN13O95857 204 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 TAF15Q92804 592 aaKnown RBP eCLIP15.91■□□□□ 0.14
VARS2-209ENST00000477288 KCNK17Q96T54 332 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 ZG16O60844 167 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 OR10S1Q8NGN2 331 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 QTRT1Q9BXR0 403 aaKnown RBP15.91■□□□□ 0.14
VARS2-209ENST00000477288 LINC00470Q9BZP3 86 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 CRYBB3P26998 211 aa15.91■□□□□ 0.14
VARS2-209ENST00000477288 HOXB1P14653 301 aaPredicted RBP15.9■□□□□ 0.14
VARS2-209ENST00000477288 SELENOHQ8IZQ5 122 aaKnown RBP15.9■□□□□ 0.14
VARS2-209ENST00000477288 KIR2DL4Q99706 377 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 ZNF79Q15937 498 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 IGHV3-49A0A0A0MS15 119 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 HSPB1P04792 205 aaKnown RBP15.9■□□□□ 0.14
VARS2-209ENST00000477288 KIAA1644Q3SXP7 199 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 PKIBQ9C010 78 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 MEF2BQ02080 365 aaPredicted RBP15.9■□□□□ 0.14
VARS2-209ENST00000477288 TGIF2-C20orf24A0A0A6YYL0 155 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 B9A039 149 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 NPIPB11E5RHQ5 1161 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 C1QCP02747 245 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 HTN3P15516 51 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 AMELYQ99218 206 aa15.9■□□□□ 0.14
VARS2-209ENST00000477288 RBM38Q9H0Z9 239 aaKnown RBP15.9■□□□□ 0.14
VARS2-209ENST00000477288 HLA-DQA1P01909 254 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 TRGC1P0CF51 173 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 CXCL2P19875 107 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 LCN2P80188 198 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 TMEM136Q6ZRR5 245 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 GOLT1AQ6ZVE7 132 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 ERASQ7Z444 233 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 FDCSPQ8NFU4 85 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 ELOVL5Q9NYP7 299 aa15.89■□□□□ 0.13
VARS2-209ENST00000477288 A0A1W2PQM1 296 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms