RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TRAM1Q15629 374 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 SMN1Q16637 294 aaKnown RBP5.58□□□□□ -1.52
BRCA1-214ENST00000477152 RBM48Q5RL73 367 aaKnown RBP5.58□□□□□ -1.52
BRCA1-214ENST00000477152 ODF3L1Q8IXM7 274 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 ZFP41Q8N8Y5 198 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 OR2K2Q8NGT1 345 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 USMG5Q96IX5 58 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 SULT4A1Q9BR01 284 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 FAAP24Q9BTP7 215 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 TM2D1Q9BX74 207 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 PEMTQ9UBM1 199 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 DNAH3Q8TD57 4116 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 TENM3Q9P273 2699 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 TRBV6-6A0A0A6YYG2 114 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 PNMA8CA0A1B0GUJ8 204 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 MAGEA13PA6NCF6 341 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 H0YJW9 148 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 EBAG9O00559 213 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 AIREO43918 545 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 ARSBP15848 533 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 CNTFRP26992 372 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 HLA-DRB3P79483 266 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 FOXI1Q12951 378 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 FXYD3Q14802 87 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 RTL8BQ17RB0 113 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 LRRC36Q1X8D7 754 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 ACSM3Q53FZ2 586 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 HSD17B12Q53GQ0 312 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 C1orf100Q5SVJ3 147 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 ASPHD1Q5U4P2 390 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 POC5Q8NA72 575 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 LFNGQ8NES3 379 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 OR6M1Q8NGM8 313 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 GGHQ92820 318 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 ORAI1Q96D31 301 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 MS4A10Q96PG2 267 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 PHB2Q99623 299 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 IFI27L2Q9H2X8 130 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 PLCXD1Q9NUJ7 323 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 SCN3BQ9NY72 215 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 CLEC2DQ9UHP7 191 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 LCE6AA0A183 80 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 LINC00473A8K010 186 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 ARL6IP5O75915 188 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 CA2P00918 260 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 IGLV1-51P01701 117 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 IGHV3-11P01762 117 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 CT45A6P0DMU7 189 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 CT45A5P0DMU8 189 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 CT45A7P0DMV0 189 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 IGHV4-30-4P0DP06 118 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 SRMP19623 302 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 PSMA1P25786 263 aaKnown RBP5.57□□□□□ -1.52
BRCA1-214ENST00000477152 PSG5Q15238 335 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 SIGIRRQ6IA17 410 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 FAM53AQ6NSI3 398 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-214ENST00000477152 ZNF880Q6PDB4 577 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 Q6ZNX1 250 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 Q6ZWC4 215 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 C6orf201Q7Z4U5 140 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 Q8N402 240 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 NPIPB3Q92617 1050 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 PTX4Q96A99 478 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 ADTRPQ96IZ2 230 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 CLCC1Q96S66 551 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 TM2D3Q9BRN9 247 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 PLGRKTQ9HBL7 147 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 C12orf4Q9NQ89 552 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 HSF4Q9ULV5 492 aa5.57□□□□□ -1.52
BRCA1-214ENST00000477152 RBM7Q9Y580 266 aaKnown RBP5.57□□□□□ -1.52
BRCA1-214ENST00000477152 TRIM64CA6NLI5 447 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 MPPED1O15442 326 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 BRI3O95415 125 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 NAPSAO96009 420 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 LALBAP00709 142 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 VEGFCP49767 419 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 SSX1Q16384 188 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 RPEL1Q2QD12 228 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 VMA21Q3ZAQ7 101 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 RPL39P5Q59GN2 51 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 AHSA2Q719I0 299 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 LAX1Q8IWV1 398 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 NANOGP1Q8N7R0 232 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 OR56B1Q8NGI3 324 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 OR9G4Q8NGQ1 327 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 GRPEL2Q8TAA5 225 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 SNAPC3Q92966 411 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 RITA1Q96K30 269 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 CMSS1Q9BQ75 279 aaKnown RBP5.56□□□□□ -1.52
BRCA1-214ENST00000477152 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 ALX4Q9H161 411 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-214ENST00000477152 SLC35D1Q9NTN3 355 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 SIGLEC8Q9NYZ4 499 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 MGAT4CQ9UBM8 478 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 PEF1Q9UBV8 284 aaKnown RBP5.56□□□□□ -1.52
BRCA1-214ENST00000477152 PSORS1C1Q9UIG5 152 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 GAB2Q9UQC2 676 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 NBEAL2Q6ZNJ1 2754 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 TRDCB7Z8K6 153 aa5.56□□□□□ -1.52
BRCA1-214ENST00000477152 DIRAS3O95661 229 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms