RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 TMEM50AO95807 157 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 IGKV1-16P04430 117 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 NKX2-1P43699 371 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-206ENST00000477085 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 PNKDQ8N490 385 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 TMEM186Q96B77 213 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 R3HDM4Q96D70 268 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 ARL6Q9H0F7 186 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 PRELID3BQ9Y3B1 194 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 MARCH11A6NNE9 402 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 BUB1B-PAK6H3BSN5 160 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 NDUFS8O00217 210 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 TOR1AO14656 332 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 CFDP00746 253 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-206ENST00000477085 HKR1P10072 659 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 PRTN3P24158 256 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 KLRD1Q13241 179 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 ZNF345Q14585 488 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 THOC7Q6I9Y2 204 aaKnown RBP11.72□□□□□ -0.53
COL4A6-206ENST00000477085 CLEC2AQ6UVW9 174 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 BEND2Q8NDZ0 799 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 OR4P4Q8NGL7 312 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 RNASE11Q8TAA1 199 aaKnown RBP11.72□□□□□ -0.53
COL4A6-206ENST00000477085 ADTRPQ96IZ2 230 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 NABP2Q9BQ15 211 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 MAP1AP78559 2803 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-206ENST00000477085 POLQO75417 2590 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 PIGBOS1A0A0B4J2F0 54 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 IGHV2-70DA0A0C4DH43 119 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 SRRM4A7MD48 611 aaKnown RBP11.72□□□□□ -0.53
COL4A6-206ENST00000477085 H0YJW9 148 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 LY6LH3BQJ8 138 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 OR2F2O95006 317 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 CRYZL1O95825 349 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 PET100P0DJ07 73 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 PAX9P55771 341 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 OR2F1Q13607 317 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 C1orf122Q6ZSJ8 110 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 SLC7A5P1Q8MH63 180 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 OR5AN1Q8NGI8 311 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-206ENST00000477085 AQP10Q96PS8 301 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 SIRPDQ9H106 197 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 NSG2Q9Y328 171 aa11.72□□□□□ -0.53
COL4A6-206ENST00000477085 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 hCG_1809904A0A1W2PP81 198 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 A0A1W2PPE2 198 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 A0A1W2PR64 198 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 A0A1W2PRV1 198 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 ENSAO43768 121 aaKnown RBP11.71□□□□□ -0.54
COL4A6-206ENST00000477085 CHST1O43916 411 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 MMP9P14780 707 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 KIR2DS2P43631 304 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 PRRX1P54821 245 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 FAM71F2Q6NXP2 309 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 CLEC9AQ6UXN8 241 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 SSX9Q7RTT3 188 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 VMO1Q7Z5L0 202 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 KIR3DL3Q8N743 410 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 INO80EQ8NBZ0 244 aaPredicted RBP11.71□□□□□ -0.54
COL4A6-206ENST00000477085 OR11H6Q8NGC7 330 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 OR4S2Q8NH73 311 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 SLC35D1Q9NTN3 355 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 COA4Q9NYJ1 87 aa11.71□□□□□ -0.54
COL4A6-206ENST00000477085 APCP25054 2843 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 CSMD1Q96PZ7 3565 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 A0A0D9SG52 128 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 E5RGE8 158 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 SSSCA1O60232 199 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 SNAPC5O75971 98 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 RLN2P04090 185 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 H2BFWTQ7Z2G1 175 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 PDZD9Q8IXQ8 264 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 UNKLQ9H9P5 680 aaKnown RBP11.7□□□□□ -0.54
COL4A6-206ENST00000477085 POLR3KQ9Y2Y1 108 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-206ENST00000477085 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
COL4A6-206ENST00000477085 ODF3BA8MYP8 253 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 RNASEK-C17orf49H0YIS7 233 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 NQO2P16083 231 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 TEX261Q6UWH6 196 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 ZNF767PQ75MW2 155 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 OR13D1Q8NGV5 346 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 RITA1Q96K30 269 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 KPTNQ9Y664 436 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 U3KQ87 197 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 MED13LQ71F56 2210 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 FOXH1O75593 365 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 ATG12O94817 140 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
COL4A6-206ENST00000477085 HOXB4P17483 251 aaPredicted RBP11.69□□□□□ -0.54
COL4A6-206ENST00000477085 RPL12P30050 165 aaKnown RBP11.69□□□□□ -0.54
COL4A6-206ENST00000477085 CLEC12BQ2HXU8 276 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 CYTL1Q9NRR1 136 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 ZFP57Q9NU63 452 aa11.69□□□□□ -0.54
COL4A6-206ENST00000477085 TMEM140Q9NV12 185 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms