RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 EGR1P18146 543 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 PRDX2P32119 198 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 RPL30P62888 115 aaKnown RBP13.35□□□□□ -0.27
VARS2-207ENST00000476162 MZT1Q08AG7 82 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 COTL1Q14019 142 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 RFESDQ8TAC1 157 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 SNIP1Q8TAD8 396 aaKnown RBP13.35□□□□□ -0.27
VARS2-207ENST00000476162 NINJ1Q92982 152 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 ATP5SQ99766 215 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 VHLLQ6RSH7 139 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 ZBTB34Q8NCN2 500 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 RARRES2Q99969 163 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 DCTN5Q9BTE1 182 aa13.35□□□□□ -0.27
VARS2-207ENST00000476162 CHD3Q12873 2000 aaKnown RBP13.34□□□□□ -0.27
VARS2-207ENST00000476162 IGHV3-43A0A0B4J1X8 118 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 CRYAAP02489 173 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 AMBPP02760 352 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 IGHV3-43DP0DP04 118 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 TIMP3P35625 211 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 NBL1P41271 181 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 UBE2KP61086 200 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 EDDM3AQ14507 147 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 SPRNQ5BIV9 151 aa13.34□□□□□ -0.27
VARS2-207ENST00000476162 GNPNAT1Q96EK6 184 aaPredicted RBP13.34□□□□□ -0.27
VARS2-207ENST00000476162 RP1L1Q8IWN7 2480 aaPredicted RBP13.34□□□□□ -0.27
VARS2-207ENST00000476162 DLK1P80370 383 aa13.33□□□□□ -0.27
VARS2-207ENST00000476162 EIF4EBP1Q13541 118 aaPredicted RBP13.33□□□□□ -0.27
VARS2-207ENST00000476162 TMEM183AQ8IXX5 376 aa13.33□□□□□ -0.27
VARS2-207ENST00000476162 PSENENQ9NZ42 101 aa13.33□□□□□ -0.27
VARS2-207ENST00000476162 NBEAQ8NFP9 2946 aa13.33□□□□□ -0.27
VARS2-207ENST00000476162 MAP1BP46821 2468 aaKnown RBP13.33□□□□□ -0.28
VARS2-207ENST00000476162 IGKV1D-17A0A075B6S4 117 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 SRRM5B3KS81 715 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 GCGP01275 180 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 IGHV3-13P01766 116 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 CCL20P78556 96 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 ZNF816Q0VGE8 651 aaPredicted RBP13.33□□□□□ -0.28
VARS2-207ENST00000476162 BTNL3Q6UXE8 466 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 THNSL2Q86YJ6 484 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 LFNGQ8NES3 379 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 DIDO1Q9BTC0 2240 aaKnown RBP13.33□□□□□ -0.28
VARS2-207ENST00000476162 MUC6Q6W4X9 2439 aa13.33□□□□□ -0.28
VARS2-207ENST00000476162 ZNF705GA8MUZ8 300 aaPredicted RBP13.32□□□□□ -0.28
VARS2-207ENST00000476162 DEFB108AA8MXU0 73 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 TGOLN2O43493 480 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 ZNF737O75373 536 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 DFFBO76075 338 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 KRASP01116 189 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 GLRXP35754 106 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 RPP30P78346 268 aaKnown RBP13.32□□□□□ -0.28
VARS2-207ENST00000476162 C4orf17Q53FE4 359 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 FAM210BQ96KR6 192 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 USF3Q68DE3 2245 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 IGHV3OR15-7A0A075B7D8 119 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 SPRY3O43610 288 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 G6PCP35575 357 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 KLF3P57682 345 aaPredicted RBP13.32□□□□□ -0.28
VARS2-207ENST00000476162 BRWD1-AS2P59051 145 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 FAM27E3Q08E93 113 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 ARL16Q0P5N6 197 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 LTC4SQ16873 150 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 SPSB3Q6PJ21 355 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 GCSAMQ8N6F7 178 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 SNX22Q96L94 193 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 SFXN3Q9BWM7 321 aa13.32□□□□□ -0.28
VARS2-207ENST00000476162 C17orf98A8MV24 154 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 C15orf65H3BRN8 121 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 IFNA5P01569 189 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 LINC00205P59089 165 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 TAS2R30P59541 319 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 ERVFC1-1P60608 527 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 HAGHQ16775 308 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 SLC25A24Q6NUK1 477 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 C22orf34Q6ZV56 151 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 SPINT2O43291 252 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 S1PR2O95136 353 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 CEACAM8P31997 349 aaPredicted RBP13.31□□□□□ -0.28
VARS2-207ENST00000476162 CATR1Q13166 79 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 KRTCAP3Q53RY4 240 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 SPANXN5Q5MJ07 72 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 SAPCD1Q5SSQ6 148 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 HAPLN4Q86UW8 402 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 MOGAT3Q86VF5 341 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 FAM57AQ8TBR7 257 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 CBLN4Q9NTU7 201 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 PSG11Q9UQ72 335 aa13.31□□□□□ -0.28
VARS2-207ENST00000476162 CLDN1O95832 211 aa13.3□□□□□ -0.28
VARS2-207ENST00000476162 BMP5P22003 454 aa13.3□□□□□ -0.28
VARS2-207ENST00000476162 CFHR2P36980 270 aa13.3□□□□□ -0.28
VARS2-207ENST00000476162 PAX5Q02548 391 aa13.3□□□□□ -0.28
VARS2-207ENST00000476162 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
VARS2-207ENST00000476162 RBFOX3A6NFN3 312 aa13.29□□□□□ -0.28
VARS2-207ENST00000476162 A8MXE2 369 aa13.29□□□□□ -0.28
VARS2-207ENST00000476162 SRP19P09132 144 aaKnown RBP13.29□□□□□ -0.28
VARS2-207ENST00000476162 HTD2P86397 168 aa13.29□□□□□ -0.28
VARS2-207ENST00000476162 C3orf36Q3SXR2 165 aa13.29□□□□□ -0.28
VARS2-207ENST00000476162 FAM180AQ6UWF9 173 aa13.29□□□□□ -0.28
VARS2-207ENST00000476162 ZNF429Q86V71 674 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms