RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 MMP23AO75900 390 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 KIR2DS2P43631 304 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 MRPS11P82912 194 aaKnown RBP12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 RUNX1Q01196 453 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 FAM74A3Q4VXF1 159 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 LILRB2Q8N423 598 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 RPUSD1Q9UJJ7 312 aaKnown RBP12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 DNASE2O00115 360 aaPredicted RBP12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 ERVK-16P61578 105 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 ARL16Q0P5N6 197 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 LRRC10Q5BKY1 277 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 LYPD2Q6UXB3 125 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 C1orf229Q6ZS94 237 aaPredicted RBP12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 MUC15Q8N387 334 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 ZNF439Q8NDP4 499 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 SCGB1C1Q8TD33 95 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 DTD1Q8TEA8 209 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 H1FXQ92522 213 aaKnown RBP12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 UQCC1Q9NVA1 299 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 PKDREJQ9NTG1 2253 aa12.65□□□□□ -0.38
RPUSD3-215ENST00000475470 YLPM1P49750 1951 aaKnown RBP12.65□□□□□ -0.38
RPUSD3-215ENST00000475470 MED19A0JLT2 244 aaPredicted RBP12.65□□□□□ -0.38
RPUSD3-215ENST00000475470 F8W036 122 aa12.65□□□□□ -0.38
RPUSD3-215ENST00000475470 RNASEK-C17orf49H0YIS7 233 aa12.65□□□□□ -0.38
RPUSD3-215ENST00000475470 SIAH2O43255 324 aa12.65□□□□□ -0.38
RPUSD3-215ENST00000475470 CEBPZOSA8MTT3 80 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 TNFRSF13BO14836 293 aaPredicted RBP12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 CTRB1P17538 263 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 THBS3P49746 956 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 HFEQ30201 348 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 CTRB2Q6GPI1 263 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 HAPLN4Q86UW8 402 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 THNSL2Q86YJ6 484 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 OR4S2Q8NH73 311 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 DDB2Q92466 427 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 CIB3Q96Q77 187 aaPredicted RBP12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 ZZEF1O43149 2961 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 ZG16O60844 167 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 OR9G9P0C7N8 305 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 NQO2P16083 231 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 SNCAP37840 140 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 TMEM200BQ69YZ2 307 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 TMEM14EPQ6UXP3 125 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 ZNF525Q8N782 197 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 OR10A7Q8NGE5 316 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 ZNF714Q96N38 554 aa12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
RPUSD3-215ENST00000475470 FAM90A9PA6NNJ1 464 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 FCN3O75636 299 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 ADCYAP1P18509 176 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 DVL1P1P54792 670 aaPredicted RBP12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 OR2B8PP59922 312 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 ERVFRD-1P60508 538 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 OR8G2PQ6IF36 304 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 FAM122CQ6P4D5 195 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 SLC25A48Q6ZT89 311 aaKnown RBP12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 VKORC1L1Q8N0U8 176 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 ADTRPQ96IZ2 230 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 ZNF251Q9BRH9 671 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 FBXO7Q9Y3I1 522 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 ARFGEF3Q5TH69 2177 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 ATRXP46100 2492 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 DVL1O14640 695 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 TSPAN9O75954 239 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 IFNA17P01571 189 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 DAOP14920 347 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 CCL3L1P16619 93 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 SLC38A11Q08AI6 406 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 SPINK9Q5DT21 86 aa12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 SMG1Q96Q15 3661 aaKnown RBP12.63□□□□□ -0.39
RPUSD3-215ENST00000475470 NDUFA2O43678 99 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 CD5P06127 495 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 HEPN1Q6WQI6 88 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 OR4C12Q96R67 309 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 KAAG1Q9UBP8 84 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 CTSZQ9UBR2 303 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 KALRNO60229 2985 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 A0A1B0GV50 99 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 SVBPQ8N300 66 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 ZNF383Q8NA42 475 aa12.62□□□□□ -0.39
RPUSD3-215ENST00000475470 LRRC75BQ2VPJ9 315 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 C10orf91Q5T1B1 145 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 RSG1Q9BU20 258 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 TMEM140Q9NV12 185 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 HCFC1P51610 2035 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 SFTA3P0C7M3 94 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 PEA15Q15121 130 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 GUK1Q16774 197 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 LFNGQ8NES3 379 aa12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 EIF5A2Q9GZV4 153 aaKnown RBP12.61□□□□□ -0.39
RPUSD3-215ENST00000475470 CARHSP1Q9Y2V2 147 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms