RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 RPL26P61254 145 aaKnown RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 FKBP1AP62942 108 aaKnown RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 PLPPR5Q32ZL2 321 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 FAM201AQ5SY85 155 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 LRRC34Q8IZ02 419 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 SLC37A2Q8TED4 501 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 ASB13Q8WXK3 278 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 FGF13Q92913 245 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 DHRS9Q9BPW9 319 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 TIMM21Q9BVV7 248 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 MS4A6AQ9H2W1 248 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 IMP3Q9NV31 184 aaKnown RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 DOK5Q9P104 306 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 RPL26L1Q9UNX3 145 aaKnown RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 HDGFL3Q9Y3E1 203 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 PCYT1BQ9Y5K3 369 aaPredicted RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 RP1L1Q8IWN7 2480 aaPredicted RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 CR1P17927 2039 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 ZNF532Q9HCE3 1301 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 GRIN2BQ13224 1484 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 PIK3R4Q99570 1358 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 OR6C6A6NF89 314 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 M0R381 172 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 BHLHE40O14503 412 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 UGT2B7P16662 529 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 PEBP1P30086 187 aaKnown RBP1.12□□□□□ -2.23
LTN1-204ENST00000475344 GABRA2P47869 451 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 CDK9P50750 372 aaKnown RBP1.12□□□□□ -2.23
LTN1-204ENST00000475344 RPL14P50914 215 aaKnown RBP1.12□□□□□ -2.23
LTN1-204ENST00000475344 RAP1GDS1P52306 607 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 CTBP2P56545 445 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 TMEM33P57088 247 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 RPS24P62847 133 aaKnown RBP1.12□□□□□ -2.23
LTN1-204ENST00000475344 ERHP84090 104 aaKnown RBP1.12□□□□□ -2.23
LTN1-204ENST00000475344 GNA13Q14344 377 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 LGALS9BQ3B8N2 356 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 TMEM31Q5JXX7 168 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 PLEKHG7Q6ZR37 379 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 SLC35E3Q7Z769 313 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 BAP18Q8IXM2 172 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 C1orf174Q8IYL3 243 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 PACRGLQ8N7B6 248 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 JOSD2Q8TAC2 188 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 ZNF625Q96I27 306 aaPredicted RBP1.12□□□□□ -2.23
LTN1-204ENST00000475344 TIPINQ9BVW5 301 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 NSRP1Q9H0G5 558 aaKnown RBP1.12□□□□□ -2.23
LTN1-204ENST00000475344 HHLA3Q9XRX5 114 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 COL4A1P02462 1669 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 MYH11P35749 1972 aa1.12□□□□□ -2.23
LTN1-204ENST00000475344 BAZ2BQ9UIF8 2168 aaKnown RBP1.11□□□□□ -2.23
LTN1-204ENST00000475344 GREB1Q4ZG55 1949 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 DISP1Q96F81 1524 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 SIPA1L1O43166 1804 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 IGHV3-64A0A075B6Q5 118 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 A0A087WUU8 490 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 ITGB1BP1O14713 200 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 BIRC5O15392 142 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 KRT75O95678 551 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 IL6P05231 212 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 CD40LGP29965 261 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 EMP1P54849 157 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 TBPL1P62380 186 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 GLO1Q04760 184 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 MED21Q13503 144 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 OR10K2Q6IF99 312 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 Q8N402 240 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 DAND5Q8N907 189 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 RPS4Y2Q8TD47 263 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 SMIM19Q96E16 107 aa1.11□□□□□ -2.23
LTN1-204ENST00000475344 LLPHQ9BRT6 129 aaKnown RBP1.11□□□□□ -2.23
LTN1-204ENST00000475344 WDR90Q96KV7 1748 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 TRGV2A0A075B6R0 118 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 MEIKINA0A087WXM9 373 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 TMSB15BA0A087X1C1 80 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 C1orf232A0A0U1RR37 186 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 IGKV2-29A2NJV5 120 aaPredicted RBP1.1□□□□□ -2.23
LTN1-204ENST00000475344 C9JCJ5 164 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 GOLGA8KD6RF30 607 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 F5H768 121 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 F8W036 122 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 GOLGA8MH3BSY2 632 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 IFNGR2P38484 337 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 FXYD7P58549 80 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 TAS2R20P59543 309 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 HLA-DRB3P79483 266 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 JOSD1Q15040 202 aaPredicted RBP1.1□□□□□ -2.23
LTN1-204ENST00000475344 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 TNFAIP8L2Q6P589 184 aaPredicted RBP1.1□□□□□ -2.23
LTN1-204ENST00000475344 Q6ZRN7 208 aaPredicted RBP1.1□□□□□ -2.23
LTN1-204ENST00000475344 SPATA12Q7Z6I5 190 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 FAM9CQ8IZT9 166 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 TMEM251Q8N6I4 163 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 RNF133Q8WVZ7 376 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 RNASE6Q93091 150 aaKnown RBP1.1□□□□□ -2.23
LTN1-204ENST00000475344 ANKRD36BP1Q96IX9 119 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 DERL2Q9GZP9 239 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 C8orf4Q9NR00 106 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 PLEKHJ1Q9NW61 149 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms