RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 NOTOA8MTQ0 251 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 H3BMQ9 156 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 LGALS1P09382 135 aaKnown RBP10.88□□□□□ -0.67
UPF3A-204ENST00000475218 CLEC2LP0C7M8 214 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 ECI1P42126 302 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 CDNFQ49AH0 187 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 ACTBL2Q562R1 376 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 ARPC1AQ92747 370 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 FLYWCH2Q96CP2 140 aaKnown RBP10.88□□□□□ -0.67
UPF3A-204ENST00000475218 MS4A10Q96PG2 267 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 ATG5Q9H1Y0 275 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 STUB1Q9UNE7 303 aa10.88□□□□□ -0.67
UPF3A-204ENST00000475218 LINC00473A8K010 186 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 SSX5O60225 188 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 APOA2P02652 100 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 MRPS15P82914 257 aaKnown RBP10.87□□□□□ -0.67
UPF3A-204ENST00000475218 FXYD3Q14802 87 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 TMEM177Q53S58 311 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 BVESQ8NE79 360 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 OR13F1Q8NGS4 319 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 ABHD5Q8WTS1 349 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 FCGR1BQ92637 280 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 RHOVQ96L33 236 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 TNCP24821 2201 aa10.87□□□□□ -0.67
UPF3A-204ENST00000475218 HUWE1Q7Z6Z7 4374 aaKnown RBP10.86□□□□□ -0.67
UPF3A-204ENST00000475218 METTL21EPA6NDL7 271 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 IGLV2-14P01704 120 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 DTYMKP23919 212 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 CD69Q07108 199 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 ARFRP1Q13795 201 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 HACD4Q5VWC8 232 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 ZBTB8BQ8NAP8 495 aaPredicted RBP10.86□□□□□ -0.67
UPF3A-204ENST00000475218 LGALS14Q8TCE9 139 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 NUDCD2Q8WVJ2 157 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 RHBDL2Q9NX52 303 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 DAPK2Q9UIK4 370 aa10.86□□□□□ -0.67
UPF3A-204ENST00000475218 PAIP2BQ9ULR5 123 aaKnown RBP10.86□□□□□ -0.67
UPF3A-204ENST00000475218 TMEM235A6NFC5 223 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 OVOL1O14753 267 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 RBMXL2O75526 392 aaKnown RBP10.85□□□□□ -0.67
UPF3A-204ENST00000475218 DUTP33316 252 aaKnown RBP10.85□□□□□ -0.67
UPF3A-204ENST00000475218 SDC2P34741 201 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 TMEM267Q0VDI3 215 aaPredicted RBP10.85□□□□□ -0.67
UPF3A-204ENST00000475218 PYHIN1Q6K0P9 492 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 SFXN4Q6P4A7 337 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 SLC25A38Q96DW6 304 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 ZNF256Q9Y2P7 627 aaPredicted RBP10.85□□□□□ -0.67
UPF3A-204ENST00000475218 STAB2Q8WWQ8 2551 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 LINC01619G3V211 115 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 LGALS7P47929 136 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 TPPP2P59282 170 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 TPRA1Q86W33 373 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 OR5T1Q8NG75 326 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 OR5H6Q8NGV6 325 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 ZMAT5Q9UDW3 170 aaKnown RBP10.85□□□□□ -0.67
UPF3A-204ENST00000475218 SORL1Q92673 2214 aa10.85□□□□□ -0.67
UPF3A-204ENST00000475218 IGKV1D-13A0A0B4J2D9 117 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 IGKV1-13P0DP09 117 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 TALDO1P37837 337 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 INSL3P51460 131 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 DEFA5Q01523 94 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 EIF4EBP1Q13541 118 aaPredicted RBP10.84□□□□□ -0.67
UPF3A-204ENST00000475218 GPR107Q5VW38 600 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 ACSM6Q6P461 480 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 GINS4Q9BRT9 223 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 CENPOQ9BU64 300 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 ST6GALNAC5Q9BVH7 336 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 SSR3Q9UNL2 185 aa10.84□□□□□ -0.67
UPF3A-204ENST00000475218 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
UPF3A-204ENST00000475218 J3QRK9 145 aa10.83□□□□□ -0.68
UPF3A-204ENST00000475218 TRGV3P03979 118 aa10.83□□□□□ -0.68
UPF3A-204ENST00000475218 NFYAP23511 347 aaPredicted RBP10.83□□□□□ -0.68
UPF3A-204ENST00000475218 BRWD1-AS2P59051 145 aa10.83□□□□□ -0.68
UPF3A-204ENST00000475218 RPL30P62888 115 aaKnown RBP10.83□□□□□ -0.68
UPF3A-204ENST00000475218 IDO2Q6ZQW0 420 aa10.83□□□□□ -0.68
UPF3A-204ENST00000475218 POC5Q8NA72 575 aa10.83□□□□□ -0.68
UPF3A-204ENST00000475218 SLA2Q9H6Q3 261 aa10.83□□□□□ -0.68
UPF3A-204ENST00000475218 SHOXO15266 292 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 CRYZL1O95825 349 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 HLA-DQB1P01920 261 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 HSPB1P04792 205 aaKnown RBP10.82□□□□□ -0.68
UPF3A-204ENST00000475218 MXD1Q05195 221 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 RGS21Q2M5E4 152 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 ZNF429Q86V71 674 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 S100ZQ8WXG8 99 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 WDR12Q9GZL7 423 aaKnown RBP10.82□□□□□ -0.68
UPF3A-204ENST00000475218 DCSTAMPQ9H295 470 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 OR2W1Q9Y3N9 320 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 RYR3Q15413 4870 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 TUSC2O75896 110 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 BRI3O95415 125 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 APELAP0DMC3 54 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 UBE2KP61086 200 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 TAGLNQ01995 201 aaKnown RBP10.82□□□□□ -0.68
UPF3A-204ENST00000475218 ZNF846Q147U1 533 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 ARL6IP1Q15041 203 aa10.82□□□□□ -0.68
UPF3A-204ENST00000475218 NEDD8Q15843 81 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms