RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 IGKV1-13P0DP09 117 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 PGAM2P15259 253 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 THBS3P49746 956 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 ABCA11PQ4W5N1 156 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 TCTEX1D4Q5JR98 221 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
CLIP2-204ENST00000474962 CENPVQ7Z7K6 275 aaPredicted RBP9.41□□□□□ -0.9
CLIP2-204ENST00000474962 NDUFA11Q86Y39 141 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 CMTM1Q8IZ96 169 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 DRAXINQ8NBI3 349 aaPredicted RBP9.41□□□□□ -0.9
CLIP2-204ENST00000474962 MOB3AQ96BX8 217 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 NABP2Q9BQ15 211 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 WDR12Q9GZL7 423 aaKnown RBP9.41□□□□□ -0.9
CLIP2-204ENST00000474962 SRRQ9GZT4 340 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 CCL28Q9NRJ3 127 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 PRELID3BQ9Y3B1 194 aa9.41□□□□□ -0.9
CLIP2-204ENST00000474962 NCBP2LA6PVI3 153 aaKnown RBP9.4□□□□□ -0.9
CLIP2-204ENST00000474962 CENPXA8MT69 81 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 MOSP00540 346 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 CT45A6P0DMU7 189 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 CT45A5P0DMU8 189 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 CT45A7P0DMV0 189 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 CD83Q01151 205 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 CATR1Q13166 79 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 LSAMPQ13449 338 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 ZNF846Q147U1 533 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 MSMO1Q15800 293 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 RTL8BQ17RB0 113 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 GLDNQ6ZMI3 551 aaPredicted RBP9.4□□□□□ -0.9
CLIP2-204ENST00000474962 C16orf82Q7Z2V1 217 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 TERB2Q8NHR7 220 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 DEDD2Q8WXF8 326 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 RBM14Q96PK6 669 aaKnown RBP9.4□□□□□ -0.9
CLIP2-204ENST00000474962 HSD17B10Q99714 261 aaKnown RBP9.4□□□□□ -0.9
CLIP2-204ENST00000474962 PRRT1Q99946 306 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 ZNF251Q9BRH9 671 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 SLC25A33Q9BSK2 321 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 WASHC3Q9Y3C0 194 aa9.4□□□□□ -0.9
CLIP2-204ENST00000474962 FAM90A9PA6NNJ1 464 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 M0QZK8 103 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 GPR31O00270 319 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 OR2F2O95006 317 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 RRASP10301 218 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 DUTP33316 252 aaKnown RBP9.39□□□□□ -0.91
CLIP2-204ENST00000474962 ECI1P42126 302 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 PPP5CP53041 499 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 RPS16P62249 146 aaKnown RBP9.39□□□□□ -0.91
CLIP2-204ENST00000474962 ZNF660Q6AZW8 331 aaPredicted RBP9.39□□□□□ -0.91
CLIP2-204ENST00000474962 ZNF66Q6ZN08 573 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 KCTD9Q7L273 389 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 SLC38A6Q8IZM9 456 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 POC5Q8NA72 575 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 OR4F17Q8NGA8 305 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 OR4D10Q8NGI6 311 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 OR5AN1Q8NGI8 311 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 OR4C16Q8NGL9 310 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 ZFAND1Q8TCF1 268 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 TCTEX1D2Q8WW35 142 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 FLYWCH2Q96CP2 140 aaKnown RBP9.39□□□□□ -0.91
CLIP2-204ENST00000474962 EAF1Q96JC9 268 aaPredicted RBP9.39□□□□□ -0.91
CLIP2-204ENST00000474962 SCGB3A2Q96PL1 93 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 OR4F4Q96R69 305 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 CCDC32Q9BV29 185 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 AKIP1Q9NQ31 210 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 SLC35D1Q9NTN3 355 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 KIAA1456Q9P272 454 aa9.39□□□□□ -0.91
CLIP2-204ENST00000474962 LINC00854A0A1B0GVQ3 168 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 TCRBV4S1A1TA0A5B7 111 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 H0YJW9 148 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 TNFSF12O43508 249 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 CD40LGP29965 261 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 UCP3P55916 312 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 EBI3Q14213 229 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 MMDQ15546 238 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 BAK1Q16611 211 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 AADACL3Q5VUY0 350 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 FAAP20Q6NZ36 180 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 IDO2Q6ZQW0 420 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 ZNF818PQ6ZRF7 136 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 PDPNQ86YL7 162 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 MFSD4AQ8N468 514 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 ZNF383Q8NA42 475 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 BVESQ8NE79 360 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 OR8H1Q8NGG4 311 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 OR51S1Q8NGJ8 323 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 TRIM63Q969Q1 353 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 C14orf166Q9Y224 244 aaKnown RBP9.38□□□□□ -0.91
CLIP2-204ENST00000474962 MOB4Q9Y3A3 225 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 COL7A1Q02388 2944 aa9.38□□□□□ -0.91
CLIP2-204ENST00000474962 NAP1L6A6NFF2 107 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 FCGR3BO75015 233 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 PROP1O75360 226 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 IL7P13232 177 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 IGLL1P15814 213 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 GNRHRP30968 328 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 KIR2DS2P43631 304 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 KLF9Q13886 244 aaPredicted RBP9.37□□□□□ -0.91
CLIP2-204ENST00000474962 PLGLAQ15195 96 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms