RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TLE4Q04727 773 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 PEA15Q15121 130 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 POU2AF1Q16633 256 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 AKR1C8PQ5T2L2 129 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 FAM53AQ6NSI3 398 aaPredicted RBP17.94■□□□□ 0.46
CCM2-206ENST00000474617 ZNF429Q86V71 674 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 MUC15Q8N387 334 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 LILRB2Q8N423 598 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 SUN5Q8TC36 379 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 DTD1Q8TEA8 209 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 TREM1Q9NP99 234 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 TIMM9Q9Y5J7 89 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 PPIHO43447 177 aaKnown RBP17.93■□□□□ 0.46
CCM2-206ENST00000474617 SOX15O60248 233 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 HRASP01112 189 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 ZNF616Q08AN1 781 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 ZNF525Q8N782 197 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 OR4A16Q8NH70 328 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 SH3BGRL3Q9H299 93 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 SAA2-SAA4A0A096LPE2 208 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 RNASEK-C17orf49H0YIS7 233 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 RBMXL2O75526 392 aaKnown RBP17.93■□□□□ 0.46
CCM2-206ENST00000474617 SAA2P0DJI9 122 aaPredicted RBP17.93■□□□□ 0.46
CCM2-206ENST00000474617 SNCAP37840 140 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 SPANXN5Q5MJ07 72 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 PRAMEF5Q5TYX0 476 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 TMEM182Q6ZP80 229 aaPredicted RBP17.93■□□□□ 0.46
CCM2-206ENST00000474617 LINC00311Q8N616 119 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 LINC01560Q8TB33 94 aa17.93■□□□□ 0.46
CCM2-206ENST00000474617 PCNX1Q96RV3 2341 aa17.92■□□□□ 0.46
CCM2-206ENST00000474617 H3BP45 60 aa17.92■□□□□ 0.46
CCM2-206ENST00000474617 ATXN7O15265 892 aaPredicted RBP17.92■□□□□ 0.46
CCM2-206ENST00000474617 METTL15P1P0C7V9 234 aa17.92■□□□□ 0.46
CCM2-206ENST00000474617 TMEM267Q0VDI3 215 aaPredicted RBP17.92■□□□□ 0.46
CCM2-206ENST00000474617 RTL8BQ17RB0 113 aa17.92■□□□□ 0.46
CCM2-206ENST00000474617 LRRC75BQ2VPJ9 315 aa17.92■□□□□ 0.46
CCM2-206ENST00000474617 DUX4L9Q6RFH8 374 aaPredicted RBP17.92■□□□□ 0.46
CCM2-206ENST00000474617 ZNF251Q9BRH9 671 aa17.92■□□□□ 0.46
CCM2-206ENST00000474617 AGAP20933 346 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 NFYBP25208 207 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 GNB2P62879 340 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 SLC38A11Q08AI6 406 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 RPL39P5Q59GN2 51 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 RAI1Q7Z5J4 1906 aaPredicted RBP17.91■□□□□ 0.46
CCM2-206ENST00000474617 LYG1Q8N1E2 194 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 FAM213BQ8TBF2 198 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 ZNF596Q8TC21 504 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 TMEM147Q9BVK8 224 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 DCAF16Q9NXF7 216 aa17.91■□□□□ 0.46
CCM2-206ENST00000474617 TRAV1-1A0A0B4J248 108 aa17.9■□□□□ 0.46
CCM2-206ENST00000474617 A0A1W2PPH5 198 aa17.9■□□□□ 0.46
CCM2-206ENST00000474617 CEBPZOSA8MTT3 80 aa17.9■□□□□ 0.46
CCM2-206ENST00000474617 F8W036 122 aa17.9■□□□□ 0.46
CCM2-206ENST00000474617 OR10P1Q8NGE3 313 aa17.9■□□□□ 0.46
CCM2-206ENST00000474617 RBMXL1Q96E39 390 aaKnown RBP17.9■□□□□ 0.46
CCM2-206ENST00000474617 SLC31A2O15432 143 aa17.89■□□□□ 0.45
CCM2-206ENST00000474617 ATP5IP56385 69 aaPredicted RBP17.89■□□□□ 0.45
CCM2-206ENST00000474617 TMEM200BQ69YZ2 307 aa17.89■□□□□ 0.45
CCM2-206ENST00000474617 ZNF833PQ6ZTB9 187 aa17.89■□□□□ 0.45
CCM2-206ENST00000474617 CENPVQ7Z7K6 275 aaPredicted RBP17.89■□□□□ 0.45
CCM2-206ENST00000474617 TGIF2LYQ8IUE0 185 aa17.89■□□□□ 0.45
CCM2-206ENST00000474617 ZCCHC24Q8N2G6 241 aaKnown RBP17.89■□□□□ 0.45
CCM2-206ENST00000474617 GGACTQ9BVM4 153 aa17.89■□□□□ 0.45
CCM2-206ENST00000474617 SPTBN4Q9H254 2564 aa17.89■□□□□ 0.45
CCM2-206ENST00000474617 ICE1Q9Y2F5 2266 aa17.89■□□□□ 0.45
CCM2-206ENST00000474617 A0A087X0M5 115 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 A0A1B0GX30 115 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 SNAPINO95295 136 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 H2AFB1P0C5Y9 115 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 DEFA5Q01523 94 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 NEUROG1Q92886 237 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 TNFRSF14Q92956 283 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 WDR61Q9GZS3 305 aaKnown RBP17.88■□□□□ 0.45
CCM2-206ENST00000474617 RAB1BQ9H0U4 201 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 FOXA2Q9Y261 457 aaPredicted RBP17.88■□□□□ 0.45
CCM2-206ENST00000474617 KPTNQ9Y664 436 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 MEX3AA1L020 520 aaKnown RBP17.88■□□□□ 0.45
CCM2-206ENST00000474617 DVL1O14640 695 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 IFNA17P01571 189 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 MBP02144 154 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 RBP4P02753 201 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 VWC2Q2TAL6 325 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 THNSL2Q86YJ6 484 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 TMEM140Q9NV12 185 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 KIAA1456Q9P272 454 aa17.88■□□□□ 0.45
CCM2-206ENST00000474617 APOA2P02652 100 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 ARG1P05089 322 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 LOXP28300 417 aaPredicted RBP17.87■□□□□ 0.45
CCM2-206ENST00000474617 RELBQ01201 579 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 TFF3Q07654 80 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 ZNF273Q14593 569 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 GUK1Q16774 197 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 TMEM186Q96B77 213 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 NKX6-2Q9C056 277 aaPredicted RBP17.87■□□□□ 0.45
CCM2-206ENST00000474617 UNKLQ9H9P5 680 aaKnown RBP17.87■□□□□ 0.45
CCM2-206ENST00000474617 FKBP11Q9NYL4 201 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 PRNDQ9UKY0 176 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 ZNF257Q9Y2Q1 563 aa17.87■□□□□ 0.45
CCM2-206ENST00000474617 ANKHD1Q8IWZ3 2542 aaKnown RBP17.86■□□□□ 0.45
CCM2-206ENST00000474617 C15orf61A6NNL5 157 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms