RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 SOX15O60248 233 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 ACTL10Q5JWF8 245 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 GCNT2Q8N0V5 402 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 CISD2Q8N5K1 135 aaKnown RBP11.75□□□□□ -0.53
RPGR-206ENST00000474584 TMEM178AQ8NBL3 297 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 LURAP1Q96LR2 239 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 ARRDC1-AS1Q9H2J1 176 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 PSG11Q9UQ72 335 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 IGHV3-43A0A0B4J1X8 118 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 SPINT2O43291 252 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 TNFSF15O95150 251 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 TYMSP04818 313 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 IGHV3-43DP0DP04 118 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 GZMBP10144 247 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 CD1BP29016 333 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 PDLIM4P50479 330 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 CLEC12BQ2HXU8 276 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 RNFT1Q5M7Z0 435 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 TRAT1Q6PIZ9 186 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 Q6ZR03 302 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 C11orf53Q8IXP5 236 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 R3HDM4Q96D70 268 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 ZDHHC11Q9H8X9 412 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 FUT9Q9Y231 359 aa11.75□□□□□ -0.53
RPGR-206ENST00000474584 KNTC1P50748 2209 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 C15orf62A8K5M9 175 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 IFNL4K9M1U5 179 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 ST8SIA5O15466 376 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 TIMM8AO60220 97 aaPredicted RBP11.74□□□□□ -0.53
RPGR-206ENST00000474584 DEFA4P12838 97 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 RPP30P78346 268 aaKnown RBP11.74□□□□□ -0.53
RPGR-206ENST00000474584 WDR82Q6UXN9 313 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 Q6ZT83 130 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 SSX9Q7RTT3 188 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 OR13A1Q8NGR1 328 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 RAB1CQ92928 201 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 BTF3L4Q96K17 158 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
RPGR-206ENST00000474584 WDR83OSQ9Y284 106 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 WDFY4Q6ZS81 3184 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 A0A1W2PPV4 95 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 LNP1A1A4G5 178 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 MPDU1O75352 247 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 ADH4P08319 380 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 CD99P14209 185 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 NUBP1P53384 320 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 LCN2P80188 198 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 PRAMEF6Q5VXH4 476 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 TPRX1Q8N7U7 411 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 OR5T1Q8NG75 326 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 QTRT1Q9BXR0 403 aaKnown RBP11.74□□□□□ -0.53
RPGR-206ENST00000474584 OR6C3Q9NZP0 311 aa11.74□□□□□ -0.53
RPGR-206ENST00000474584 DEFB108AA8MXU0 73 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 TFF1P04155 84 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 GPR12P47775 334 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 HTD2P86397 168 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 HOXA4Q00056 320 aaPredicted RBP11.73□□□□□ -0.53
RPGR-206ENST00000474584 TMEM249Q2WGJ8 235 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 CST9LP1Q5W188 147 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 LINC01551Q86U37 167 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 RFESDQ8TAC1 157 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 TMEM37Q8WXS4 190 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 KCNIP2Q9NS61 270 aa11.73□□□□□ -0.53
RPGR-206ENST00000474584 URB1O60287 2271 aaKnown RBP11.73□□□□□ -0.53
RPGR-206ENST00000474584 F6UZH7 168 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 MKRN2OSH3BPM6 223 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 TMPRSS2O15393 492 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 GCGP01275 180 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 CHRNA7P36544 502 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 LINC00205P59089 165 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 UBE2G2P60604 165 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 FAM214BQ7L5A3 538 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 TMEM18Q96B42 140 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 MEGF10Q96KG7 1140 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 TRAV38-1A0A0B4J264 116 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 FAM90A9PA6NNJ1 464 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 TECTAO75443 2155 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 IGKV3-15P01624 115 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 CRYAAP02489 173 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 NPPCP23582 126 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 EDDM3BP56851 147 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 PRAMEF5Q5TYX0 476 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 Q8N7P7 452 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 CLCF1Q9UBD9 225 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 METRNQ9UJH8 293 aa11.72□□□□□ -0.53
RPGR-206ENST00000474584 HPRT1P00492 218 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 PAX1P15863 534 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 SPCS3P61009 180 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 GNB1P62873 340 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 FOXF2Q12947 444 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 EDDM3AQ14507 147 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 FAM78BQ5VT40 261 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 CNEP1R1Q8N9A8 125 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 OR4A16Q8NH70 328 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 TRIB1Q96RU8 372 aa11.71□□□□□ -0.53
RPGR-206ENST00000474584 FCGR3BO75015 233 aa11.71□□□□□ -0.54
RPGR-206ENST00000474584 KITLGP21583 273 aa11.71□□□□□ -0.54
RPGR-206ENST00000474584 DUTP33316 252 aaKnown RBP11.71□□□□□ -0.54
RPGR-206ENST00000474584 OPRK1P41145 380 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms