RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 HBE1P02100 147 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 IL6RP08887 468 aaPredicted RBP8.07□□□□□ -1.12
USP39-214ENST00000474572 SAA2P0DJI9 122 aaPredicted RBP8.07□□□□□ -1.12
USP39-214ENST00000474572 DAOP14920 347 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 NQO2P16083 231 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 LOXP28300 417 aaPredicted RBP8.07□□□□□ -1.12
USP39-214ENST00000474572 APOBEC3AP31941 199 aaPredicted RBP8.07□□□□□ -1.12
USP39-214ENST00000474572 GNB2P62879 340 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 RELBQ01201 579 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 FAM74A3Q4VXF1 159 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 AKR1C8PQ5T2L2 129 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 LILRB2Q8N423 598 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 DEFB108BQ8NET1 73 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 OR4S2Q8NH73 311 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 ZNF596Q8TC21 504 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 SCGB1C1Q8TD33 95 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 C17orf50Q8WW18 174 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 MBD3L1Q8WWY6 194 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 TAF15Q92804 592 aaKnown RBP eCLIP8.07□□□□□ -1.12
USP39-214ENST00000474572 S1PR3Q99500 378 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 TMEM147Q9BVK8 224 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 SLC25A10Q9UBX3 287 aaPredicted RBP8.07□□□□□ -1.12
USP39-214ENST00000474572 APC2O95996 2303 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 MMP23AO75900 390 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 CD3EP07766 207 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 VDAC2P45880 294 aaPredicted RBP8.06□□□□□ -1.12
USP39-214ENST00000474572 NPBWR1P48145 328 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 SPCS3P61009 180 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 MRPS11P82912 194 aaKnown RBP8.06□□□□□ -1.12
USP39-214ENST00000474572 ADORA2A-AS1P86434 159 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 TLE4Q04727 773 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 ZNF506Q5JVG8 444 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 PRAMEF5Q5TYX0 476 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 FAM71F2Q6NXP2 309 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 HEPN1Q6WQI6 88 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 ZNF833PQ6ZTB9 187 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 THNSL2Q86YJ6 484 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 ZCCHC24Q8N2G6 241 aaKnown RBP8.06□□□□□ -1.12
USP39-214ENST00000474572 LINC00311Q8N616 119 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 C8orf31Q8N9H6 132 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 ZNF383Q8NA42 475 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 CLRN3Q8NCR9 226 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 NEUROG1Q92886 237 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 ZDHHC16Q969W1 377 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 PINX1Q96BK5 328 aaKnown RBP8.06□□□□□ -1.12
USP39-214ENST00000474572 RBMXL1Q96E39 390 aaKnown RBP8.06□□□□□ -1.12
USP39-214ENST00000474572 RSG1Q9BU20 258 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 QTRT1Q9BXR0 403 aaKnown RBP8.06□□□□□ -1.12
USP39-214ENST00000474572 GAL3ST2Q9H3Q3 398 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 CTSZQ9UBR2 303 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 HCFC1P51610 2035 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 ARID1AO14497 2285 aa8.06□□□□□ -1.12
USP39-214ENST00000474572 CACNA1DQ01668 2161 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 USF3Q68DE3 2245 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 RBFOX3A6NFN3 312 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 C15orf61A6NNL5 157 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 PRSS46E5RG02 174 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 TMPRSS2O15393 492 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 SIAH2O43255 324 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 NDUFA2O43678 99 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 DLX6P56179 175 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 ERVK-16P61578 105 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 CCL20P78556 96 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 PMS2P11Q13670 270 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 SLC25A24Q6NUK1 477 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.05□□□□□ -1.12
USP39-214ENST00000474572 OR10P1Q8NGE3 313 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 ZCCHC14Q8WYQ9 949 aaKnown RBP8.05□□□□□ -1.12
USP39-214ENST00000474572 LEAP2Q969E1 77 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 TMEM204Q9BSN7 226 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 DYNLRB1Q9NP97 96 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 RPRMQ9NS64 109 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 TMEM140Q9NV12 185 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 NDRG3Q9UGV2 375 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 FOXA2Q9Y261 457 aaPredicted RBP8.05□□□□□ -1.12
USP39-214ENST00000474572 FBXO7Q9Y3I1 522 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 TET2Q6N021 2002 aaPredicted RBP8.05□□□□□ -1.12
USP39-214ENST00000474572 BSNQ9UPA5 3926 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 CFAP47Q6ZTR5 3102 aa8.05□□□□□ -1.12
USP39-214ENST00000474572 ANKRD11Q6UB99 2663 aaPredicted RBP8.05□□□□□ -1.12
USP39-214ENST00000474572 PTPRQQ9UMZ3 2332 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 A0A087X0M5 115 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 UBE2L5PA0A1B0GUS4 154 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 A0A1B0GX30 115 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 MED19A0JLT2 244 aaPredicted RBP8.04□□□□□ -1.12
USP39-214ENST00000474572 CEBPZOSA8MTT3 80 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 CCL21O00585 134 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 GPR37O15354 613 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 NDUFB3O43676 98 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 NDUFS6O75380 124 aaKnown RBP8.04□□□□□ -1.12
USP39-214ENST00000474572 F12P00748 615 aaPredicted RBP8.04□□□□□ -1.12
USP39-214ENST00000474572 IGHV3-7P01780 117 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 HSPB1P04792 205 aaKnown RBP8.04□□□□□ -1.12
USP39-214ENST00000474572 SRP19P09132 144 aaKnown RBP8.04□□□□□ -1.12
USP39-214ENST00000474572 NDUFB7P17568 137 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 PAX6P26367 422 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 PPOXP50336 477 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 PPT1P50897 306 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 RPL31P62899 125 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms