RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 LRRC37A5PQ49AS3 106 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 TMEM268Q5VZI3 342 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 HCP5Q6MZN7 132 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 H2BFWTQ7Z2G1 175 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 ODF3L1Q8IXM7 274 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 DRAXINQ8NBI3 349 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-206ENST00000474564 DMBX1Q8NFW5 382 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 OR2T10Q8NGZ9 312 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 VSTM2AQ8TAG5 236 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 OSR1Q8TAX0 266 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-206ENST00000474564 THAP6Q8TBB0 222 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 RBPMSQ93062 196 aaKnown RBP8.39□□□□□ -1.07
COL12A1-206ENST00000474564 ST6GALNAC6Q969X2 333 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 RNF5Q99942 180 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 NABP2Q9BQ15 211 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 PLEKHA2Q9HB19 425 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 RAB18Q9NP72 206 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 TMEM160Q9NX00 188 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 PRR13Q9NZ81 148 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 C1RLQ9NZP8 487 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 GSKIPQ9P0R6 139 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 PITPNC1Q9UKF7 332 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 TMED3Q9Y3Q3 217 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
COL12A1-206ENST00000474564 IGHV3OR16-10A0A075B7F0 116 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 RBMXL2O75526 392 aaKnown RBP8.38□□□□□ -1.07
COL12A1-206ENST00000474564 SNAPC5O75971 98 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 CDS2O95674 445 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 CRYZL1O95825 349 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 IGLV2-14P01704 120 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 NQO2P16083 231 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 UCP1P25874 307 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 S100A10P60903 97 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 ANKRD55Q3KP44 614 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 VMA21Q3ZAQ7 101 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 OR2B11Q5JQS5 317 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 FAM120AOSQ5T036 256 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 CLEC9AQ6UXN8 241 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 BRD3OSQ6XYD6 125 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 FAM219AQ8IW50 185 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 ZNF383Q8NA42 475 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 OR5AN1Q8NGI8 311 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 SEC22AQ96IW7 307 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 TMEM56Q96MV1 263 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 TP53RKQ96S44 253 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 ZNF251Q9BRH9 671 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 MRPL20Q9BYC9 149 aaKnown RBP8.38□□□□□ -1.07
COL12A1-206ENST00000474564 ZFP57Q9NU63 452 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 KIAA1456Q9P272 454 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 TMEM56-RWDD3S4R434 201 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 LRBAP50851 2863 aa8.38□□□□□ -1.07
COL12A1-206ENST00000474564 UTP20O75691 2785 aaKnown RBP8.37□□□□□ -1.07
COL12A1-206ENST00000474564 NAV2Q8IVL1 2488 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 TIMM23O14925 209 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 TSC22D2O75157 780 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 ADAP1O75689 374 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 MOSP00540 346 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 RLN2P04090 185 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 IGHV4-38-2P0DP08 117 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 VDAC1P21796 283 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 RPL30P62888 115 aaKnown RBP8.37□□□□□ -1.07
COL12A1-206ENST00000474564 SUPT4H1P63272 117 aaKnown RBP8.37□□□□□ -1.07
COL12A1-206ENST00000474564 TMEM187Q14656 261 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 PLGLAQ15195 96 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 AANATQ16613 207 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 IAH1Q2TAA2 248 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-206ENST00000474564 UTF1Q5T230 341 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 LHFPL4Q7Z7J7 247 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 THNSL2Q86YJ6 484 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 FOXRED2Q8IWF2 684 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 LRTM2Q8N967 370 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 OR8H1Q8NGG4 311 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 GLYATL2Q8WU03 294 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 C2orf50Q96LR7 162 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 HARBI1Q96MB7 349 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 MEGF9Q9H1U4 602 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 ZC4H2Q9NQZ6 224 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 ZNRD1Q9P1U0 126 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 CDC42EP3Q9UKI2 254 aa8.37□□□□□ -1.07
COL12A1-206ENST00000474564 ANKRD17O75179 2603 aaKnown RBP8.37□□□□□ -1.07
COL12A1-206ENST00000474564 PTPN13Q12923 2485 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 LINC00473A8K010 186 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 H0YJW9 148 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 WRBO00258 174 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 ACTL6BO94805 426 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 KRASP01116 189 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 DYNLT3P51808 116 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 EIF4EBP1Q13541 118 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-206ENST00000474564 LRRC75BQ2VPJ9 315 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 TMEM177Q53S58 311 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 GGNBP1Q5YKI7 109 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 RUSC1-AS1Q66K80 236 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 OR4A16Q8NH70 328 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 OR5R1Q8NH85 324 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 DDB2Q92466 427 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 LSM10Q969L4 123 aaKnown RBP8.36□□□□□ -1.07
COL12A1-206ENST00000474564 R3HDM4Q96D70 268 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 CLCC1Q96S66 551 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 GPHA2Q96T91 129 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms