RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 ERVS71-1P61550 626 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 PSG4Q00888 419 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 TGFBR3Q03167 851 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 MRPL49Q13405 166 aaKnown RBP6.8□□□□□ -1.32
CCDC93-208ENST00000474546 SPANXN5Q5MJ07 72 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 FFAR4Q5NUL3 377 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 CDPF1Q6NVV7 123 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 ZNF705AQ6ZN79 300 aaPredicted RBP6.8□□□□□ -1.32
CCDC93-208ENST00000474546 SSX7Q7RTT5 188 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 C5orf24Q7Z6I8 188 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 FAM58AQ8N1B3 248 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 RPP25LQ8N5L8 163 aaKnown RBP6.8□□□□□ -1.32
CCDC93-208ENST00000474546 ZNF645Q8N7E2 425 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 SIGLECL1Q8N7X8 197 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 OR10G8Q8NGN5 311 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 OR52E5Q8NH55 327 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 NINJ1Q92982 152 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 NAT6Q93015 286 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 TBX15Q96SF7 602 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 HSD17B10Q99714 261 aaKnown RBP6.8□□□□□ -1.32
CCDC93-208ENST00000474546 NPCDR1Q9BY65 106 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 SAMD10Q9BYL1 202 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 WNT5BQ9H1J7 359 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 ZNF703Q9H7S9 590 aaPredicted RBP6.8□□□□□ -1.32
CCDC93-208ENST00000474546 GPR35Q9HC97 309 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 IL36BQ9NZH7 164 aa6.8□□□□□ -1.32
CCDC93-208ENST00000474546 IGKV3D-15A0A087WSY6 115 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 FAM221AA4D161 298 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 LRRC30A6NM36 301 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 G3V3Y1 287 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 J3QT63 122 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 SLC33A1O00400 549 aaPredicted RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 ITGB1BP1O14713 200 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 IL18BPO95998 194 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 HLA-DQA1P01909 254 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 P04436 131 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 MMP7P09237 267 aaPredicted RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 SCTP09683 121 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 PSG2P11465 335 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 AREGP15514 252 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 BMP5P22003 454 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 KIR2DS2P43631 304 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 RPL29P47914 159 aaKnown RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 THBS3P49746 956 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 ELLP55199 621 aaPredicted RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 OR1D5P58170 312 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 SUMO1P63165 101 aaKnown RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 MZT1Q08AG7 82 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 TRA2AQ13595 282 aaKnown RBP eCLIP6.79□□□□□ -1.322e-6■■■■□ 26.3
CCDC93-208ENST00000474546 COTL1Q14019 142 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 P2RY6Q15077 328 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 DEFB133Q30KQ1 61 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 AARDQ4LEZ3 155 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 SAPCD1Q5SSQ6 148 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 FAM78BQ5VT40 261 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 Q6ZS52 159 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 SFTPA2Q8IWL1 248 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 DMRTC2Q8IXT2 367 aaPredicted RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 ZIC4Q8N9L1 334 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 DTD1Q8TEA8 209 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 ZNF385AQ96PM9 386 aaKnown RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 RTL8AQ9BWD3 113 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 OCIAD1Q9NX40 245 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 ELOVL5Q9NYP7 299 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 ERRFI1Q9UJM3 462 aaPredicted RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 SLC45A2Q9UMX9 530 aa6.79□□□□□ -1.32
CCDC93-208ENST00000474546 POLR3KQ9Y2Y1 108 aaPredicted RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 MRPS16Q9Y3D3 137 aaKnown RBP6.79□□□□□ -1.32
CCDC93-208ENST00000474546 IGKV1D-13A0A0B4J2D9 117 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 C2orf72A6NCS6 295 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 C17orf51A8MQB3 221 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 SIRPB1O00241 398 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 CDIPTO14735 213 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 SH2D1BO14796 132 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 EREGO14944 169 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 TIAF1O95411 115 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 IGKV1-13P0DP09 117 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 GLI4P10075 376 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 BCL3P20749 454 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 FGF8P55075 233 aaPredicted RBP6.78□□□□□ -1.32
CCDC93-208ENST00000474546 KLF3P57682 345 aaPredicted RBP6.78□□□□□ -1.32
CCDC93-208ENST00000474546 RHOBP62745 196 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 ZNF90Q03938 601 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 RTP5Q14D33 572 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 GABRA6Q16445 453 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 RPEL1Q2QD12 228 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 CEACAM16Q2WEN9 425 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 PDLIM3Q53GG5 364 aaPredicted RBP6.78□□□□□ -1.32
CCDC93-208ENST00000474546 MRPL14Q6P1L8 145 aaKnown RBP6.78□□□□□ -1.32
CCDC93-208ENST00000474546 TEX38Q6PEX7 206 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 H2BFWTQ7Z2G1 175 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 BAGE3Q86Y29 109 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 BAGE2Q86Y30 109 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 C1orf174Q8IYL3 243 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 GCNT2Q8N0V5 402 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 FGFRL1Q8N441 504 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 SGMS2Q8NHU3 365 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 THAP3Q8WTV1 239 aaPredicted RBP6.78□□□□□ -1.32
CCDC93-208ENST00000474546 C11orf52Q96A22 123 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 SLC35E1Q96K37 410 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms