RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 H1FOOQ8IZA3 346 aaPredicted RBP14.42□□□□□ -0.1
CCDC88B-206ENST00000473405 BVESQ8NE79 360 aa14.42□□□□□ -0.1
CCDC88B-206ENST00000473405 OR6Q1Q8NGQ2 317 aa14.42□□□□□ -0.1
CCDC88B-206ENST00000473405 RAB26Q9ULW5 256 aa14.42□□□□□ -0.1
CCDC88B-206ENST00000473405 GABARAPL2P60520 117 aa14.41□□□□□ -0.1
CCDC88B-206ENST00000473405 DEFA5Q01523 94 aa14.41□□□□□ -0.1
CCDC88B-206ENST00000473405 RTL8BQ17RB0 113 aa14.41□□□□□ -0.1
CCDC88B-206ENST00000473405 HAPLN4Q86UW8 402 aa14.41□□□□□ -0.1
CCDC88B-206ENST00000473405 SBSPONQ8IVN8 264 aa14.41□□□□□ -0.1
CCDC88B-206ENST00000473405 GINS4Q9BRT9 223 aa14.41□□□□□ -0.1
CCDC88B-206ENST00000473405 ZNF355PQ9NSJ1 428 aa14.41□□□□□ -0.1
CCDC88B-206ENST00000473405 METTL21EPA6NDL7 271 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 TRIM64CA6NLI5 447 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 LINC00473A8K010 186 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 SHOXO15266 292 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 BRI3O95415 125 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 FRMD6-AS1P0C7T7 363 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 DUTP33316 252 aaKnown RBP14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 TAGLNQ01995 201 aaKnown RBP14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 CBX3Q13185 183 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 ARFRP1Q13795 201 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 UBE2UQ5VVX9 321 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 OVCH2Q7RTZ1 564 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 ATG5Q9H1Y0 275 aa14.4□□□□□ -0.1
CCDC88B-206ENST00000473405 C13orf42A0A1B0GVH6 325 aa14.39□□□□□ -0.11
CCDC88B-206ENST00000473405 IGLV1-51P01701 117 aa14.39□□□□□ -0.11
CCDC88B-206ENST00000473405 DTYMKP23919 212 aa14.39□□□□□ -0.11
CCDC88B-206ENST00000473405 TALDO1P37837 337 aa14.39□□□□□ -0.11
CCDC88B-206ENST00000473405 OR4C12Q96R67 309 aa14.39□□□□□ -0.11
CCDC88B-206ENST00000473405 TINAGL1Q9GZM7 467 aaPredicted RBP14.39□□□□□ -0.11
CCDC88B-206ENST00000473405 RANGRFQ9HD47 186 aaPredicted RBP14.39□□□□□ -0.11
CCDC88B-206ENST00000473405 RBM7Q9Y580 266 aaKnown RBP14.39□□□□□ -0.11
CCDC88B-206ENST00000473405 A0A0G2JLM5 398 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 ANKRD34BA5PLL1 514 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 MRPS14O60783 128 aaKnown RBP14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 RBMXL2O75526 392 aaKnown RBP14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 CRYZL1O95825 349 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 APELAP0DMC3 54 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 RRASP10301 218 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 ZP3P21754 424 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 FGF9P31371 208 aaPredicted RBP14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 UBE2KP61086 200 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 DYRK1AQ13627 763 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 IDO2Q6ZQW0 420 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 SPARTQ8N0X7 666 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 ADTRPQ96IZ2 230 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 TMEM68Q96MH6 324 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 TXNL4BQ9NX01 149 aaKnown RBP14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 STUB1Q9UNE7 303 aa14.38□□□□□ -0.11
CCDC88B-206ENST00000473405 STARD9Q9P2P6 4700 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 NOTOA8MTQ0 251 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 TRBV12-3P01733 135 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 KLF5Q13887 457 aaPredicted RBP14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 ARL6IP1Q15041 203 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 PRSS8Q16651 343 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 CDNFQ49AH0 187 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 HACD4Q5VWC8 232 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 TEX45Q8NA69 505 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 ADAD2Q8NCV1 583 aaKnown RBP14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 RCHY1Q96PM5 261 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 CENPOQ9BU64 300 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 ELOVL1Q9BW60 279 aa14.37□□□□□ -0.11
CCDC88B-206ENST00000473405 TMEM235A6NFC5 223 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 MSGN1A6NI15 193 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 IGLV2-14P01704 120 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 PSMB9P28065 219 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 VMA21Q3ZAQ7 101 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 ZNF343Q6P1L6 599 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 IL34Q6ZMJ4 242 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 Q8N1Y9 231 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 ZNF645Q8N7E2 425 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 OSR1Q8TAX0 266 aaPredicted RBP14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 NUDCD2Q8WVJ2 157 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 SRSF12Q8WXF0 261 aaKnown RBP14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 RSRP1Q9BUV0 290 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 COA4Q9NYJ1 87 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 ADAM30Q9UKF2 790 aa14.36□□□□□ -0.11
CCDC88B-206ENST00000473405 RYR2Q92736 4967 aa14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 SAA1P0DJI8 122 aaPredicted RBP14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 AADACP22760 399 aa14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 NFYAP23511 347 aaPredicted RBP14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 TNXAQ16473 311 aa14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 PHB2Q99623 299 aa14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 ST6GALNAC5Q9BVH7 336 aa14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 DCSTAMPQ9H295 470 aa14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 ZNF430Q9H8G1 570 aaPredicted RBP14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 DAPK2Q9UIK4 370 aa14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 OR2W1Q9Y3N9 320 aa14.35□□□□□ -0.11
CCDC88B-206ENST00000473405 IGKV1D-13A0A0B4J2D9 117 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 C3orf84H3BNL1 204 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 J3QRK9 145 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 SSX5O60225 188 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 HLA-DQB1P01920 261 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 IGKV1-13P0DP09 117 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 SYNJ2BPP57105 145 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 TPRA1Q86W33 373 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 ANKRD13BQ86YJ7 626 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 OR9G4Q8NGQ1 327 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 LGALS14Q8TCE9 139 aa14.34□□□□□ -0.11
CCDC88B-206ENST00000473405 ACOT12Q8WYK0 555 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms