RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 CCDC144NLQ6NUI1 221 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 IFI27L1Q96BM0 104 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 C5orf66Q9H5L9 145 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 KLHDC2Q9Y2U9 406 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 DEFB108AA8MXU0 73 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 H3BMM0 161 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 C1QAP02745 245 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 ACTL10Q5JWF8 245 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 UBE2WQ96B02 151 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 MFRPQ9BY79 579 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 FOXH1O75593 365 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 ANOS1P23352 680 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 BCORP1Q8N888 145 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 KCNK17Q96T54 332 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 RASL11BQ9BPW5 248 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 CITO14578 2027 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 A0A1W2PPC1 479 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 FNDC10F2Z333 226 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 M0R2P5 195 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 GPX1P07203 203 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 IL6RP08887 468 aaPredicted RBP7.74□□□□□ -1.17
COL6A3-210ENST00000473258 PXNP49023 591 aaPredicted RBP7.74□□□□□ -1.17
COL6A3-210ENST00000473258 SUMO3P55854 103 aaPredicted RBP7.74□□□□□ -1.17
COL6A3-210ENST00000473258 COQ2Q96H96 371 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 PRSS27Q9BQR3 290 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 C19orf24Q9BVV8 132 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 H3BNC9 293 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 KCNMB1Q16558 191 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 HIGD1AQ9Y241 93 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 MEGF6O75095 1541 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 FOXL1Q12952 345 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 LHX8Q68G74 356 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 SCNM1Q9BWG6 230 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 NPIPB11E5RHQ5 1161 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 IQCF3P0C7M6 154 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 ALKBH6Q3KRA9 238 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 LINC01559Q495D7 138 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 KLF17Q5JT82 389 aaPredicted RBP7.74□□□□□ -1.17
COL6A3-210ENST00000473258 DEFB108BQ8NET1 73 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 OR9G1Q8NH87 305 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 KIF20BQ96Q89 1820 aa7.74□□□□□ -1.17
COL6A3-210ENST00000473258 KIR2DS5A0A0G2JLQ3 304 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 A0A0G2JNG1 304 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 A0A1W2PPM0 123 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 KIR2DS3K7RE56 304 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 EMDP50402 254 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 SYNJ2BPP57105 145 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 RPL8P62917 257 aaKnown RBP7.73□□□□□ -1.17
COL6A3-210ENST00000473258 VGLL4Q14135 290 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 KIR2DS5Q14953 304 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 C1QL3Q5VWW1 255 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 DECR2Q9NUI1 292 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 UPK3AO75631 287 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 Q6AWC8 147 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 OR51G1Q8NGK1 321 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 HS3ST3B1Q9Y662 390 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 R4GN57 208 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 PREX2Q70Z35 1606 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 ASXL3Q9C0F0 2248 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 COL3A1P02461 1466 aaPredicted RBP7.73□□□□□ -1.17
COL6A3-210ENST00000473258 NTN1O95631 604 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 IL2RAP01589 272 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 GAS1P54826 345 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 C15orf53Q8NAA6 179 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 NOXO1Q8NFA2 376 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 SF3B6Q9Y3B4 125 aaKnown RBP7.73□□□□□ -1.17
COL6A3-210ENST00000473258 USP32Q8NFA0 1604 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 C9orf50Q5SZB4 431 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 BHLHA9Q7RTU4 235 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 MORN4Q8NDC4 146 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 OSTCQ9NRP0 149 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 LOXL2Q9Y4K0 774 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 HIGD1CA8MV81 97 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 SYS1-DBNDD2H3BUS1 97 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 SMAD7O15105 426 aaKnown RBP7.73□□□□□ -1.17
COL6A3-210ENST00000473258 MMP23AO75900 390 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 MOSP00540 346 aa7.73□□□□□ -1.17
COL6A3-210ENST00000473258 SUMO2P61956 95 aaKnown RBP7.73□□□□□ -1.17
COL6A3-210ENST00000473258 DISP1Q96F81 1524 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 NPIPB5A8MRT5 1133 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 K7ESF4 209 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 LEPP41159 167 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 RHOGP84095 191 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 KIAA0040Q15053 153 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 APOBEC4Q8WW27 367 aaKnown RBP7.72□□□□□ -1.17
COL6A3-210ENST00000473258 NAT6Q93015 286 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 SF3B5Q9BWJ5 86 aaKnown RBP7.72□□□□□ -1.17
COL6A3-210ENST00000473258 SCO2A0A1W2PP80 73 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 SAP30O75446 220 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 CDAP32320 146 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 FZR1Q9UM11 496 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 MRPS18BQ9Y676 258 aaKnown RBP7.72□□□□□ -1.17
COL6A3-210ENST00000473258 TPRP12270 2363 aaKnown RBP7.72□□□□□ -1.17
COL6A3-210ENST00000473258 TEX48A0A1B0GUV7 120 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 KLRC4-KLRK1H3BQV0 150 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 IGHV3-9P01782 118 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 INAFM2P0DMQ5 153 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 DRD3P35462 400 aa7.72□□□□□ -1.17
COL6A3-210ENST00000473258 TDHQ8IZJ6 230 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms