RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 CBX5P45973 191 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 ZNF616Q08AN1 781 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 AKIRIN2Q53H80 203 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 UBE2NLQ5JXB2 153 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 C9orf66Q5T8R8 295 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 LFNGQ8NES3 379 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 OR11H1Q8NG94 326 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 S100A16Q96FQ6 103 aaKnown RBP12.15□□□□□ -0.46
MRPL55-226ENST00000473066 DCUN1D5Q9BTE7 237 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 GNB4Q9HAV0 340 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 IFT46Q9NQC8 304 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 NUBP2Q9Y5Y2 271 aa12.15□□□□□ -0.46
MRPL55-226ENST00000473066 CREBL2O60519 120 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-226ENST00000473066 TUSC2O75896 110 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 HLA-DQB1P01920 261 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 TPPP2P59282 170 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 RUNX1Q01196 453 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 C19orf54Q5BKX5 351 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 SAMD12Q8N8I0 201 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 OR1N2Q8NGR9 330 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 OSR1Q8TAX0 266 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-226ENST00000473066 PHB2Q99623 299 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 SLA2Q9H6Q3 261 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 AUNIPQ9H7T9 357 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
MRPL55-226ENST00000473066 RBMX2Q9Y388 322 aaKnown RBP12.14□□□□□ -0.47
MRPL55-226ENST00000473066 TNCP24821 2201 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 SEC14L6B5MCN3 397 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 SOX15O60248 233 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 FCGR3BO75015 233 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 ACTL6BO94805 426 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 IGLV2-23P01705 113 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 RPS19P39019 145 aaKnown RBP12.13□□□□□ -0.47
MRPL55-226ENST00000473066 EGFEM1PQ0D2K5 195 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 DCTN2Q13561 401 aaKnown RBP12.13□□□□□ -0.47
MRPL55-226ENST00000473066 FHL3Q13643 280 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 TCTEX1D2Q8WW35 142 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 DDB2Q92466 427 aa12.13□□□□□ -0.47
MRPL55-226ENST00000473066 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
MRPL55-226ENST00000473066 HSD17B10Q99714 261 aaKnown RBP12.13□□□□□ -0.47
MRPL55-226ENST00000473066 PRKDCP78527 4128 aaKnown RBP12.13□□□□□ -0.47
MRPL55-226ENST00000473066 LINC00473A8K010 186 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 I3L521 148 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 MPPED1O15442 326 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 XRCC3O43542 346 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 TRGV3P03979 118 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 LGALS1P09382 135 aaKnown RBP12.12□□□□□ -0.47
MRPL55-226ENST00000473066 EGR2P11161 476 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-226ENST00000473066 UBE2KP61086 200 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 DGCR2P98153 550 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 TNXAQ16473 311 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 OR2B11Q5JQS5 317 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 GVQW1Q8N7I0 195 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 TEX45Q8NA69 505 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 POC5Q8NA72 575 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 OR4S2Q8NH73 311 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 SECTM1Q8WVN6 248 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 TMEM68Q96MH6 324 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 MS4A10Q96PG2 267 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 FUNDC2Q9BWH2 189 aa12.12□□□□□ -0.47
MRPL55-226ENST00000473066 IGKV1D-13A0A0B4J2D9 117 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 TRIM64CA6NLI5 447 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 H3BUA1 57 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 ARPC1BO15143 372 aaKnown RBP12.11□□□□□ -0.47
MRPL55-226ENST00000473066 FCER2P06734 321 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 IGKV1-13P0DP09 117 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 FCGR2CP31995 323 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 HERV-K104P61576 105 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 OR13F1Q8NGS4 319 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 SLC25A46Q96AG3 418 aa12.11□□□□□ -0.47
MRPL55-226ENST00000473066 TGP01266 2768 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 C13orf42A0A1B0GVH6 325 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 MEIS3P1A6NDR6 274 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 LINC01619G3V211 115 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 K7EIL1 84 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 RAMP3O60896 148 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 PPYP01298 95 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 IGHV3-11P01762 117 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 CRYGBP07316 175 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 PTHLHP12272 177 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 AADACP22760 399 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 KIR2DS2P43631 304 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 TAS2R20P59543 309 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 FXYD4P59646 89 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 NCS1P62166 190 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 PJVKQ0ZLH3 352 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 CATR1Q13166 79 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 KIAA0141Q14154 515 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-226ENST00000473066 CDK10Q15131 360 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 ZNF66Q6ZN08 573 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 VSTM2AQ8TAG5 236 aa12.1□□□□□ -0.47
MRPL55-226ENST00000473066 COA4Q9NYJ1 87 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms