RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ARL11Q969Q4 196 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 TMEM230Q96A57 120 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 GALMQ96C23 342 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 SCGB3A2Q96PL1 93 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 OR8B2Q96RD0 313 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 C12orf57Q99622 126 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 CITED1Q99966 193 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 SLC5A7Q9GZV3 580 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 PARP12Q9H0J9 701 aaKnown RBP5.2□□□□□ -1.58
HDAC1-205ENST00000472928 MED28Q9H204 178 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 GHITMQ9H3K2 345 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 C5orf66Q9H5L9 145 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 C19orf12Q9NSK7 152 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 RDH8Q9NYR8 311 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 KAAG1Q9UBP8 84 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 LINC00312Q9Y6C7 94 aa5.2□□□□□ -1.58
HDAC1-205ENST00000472928 DYNC2H1Q8NCM8 4307 aaKnown RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 hADV38S2A0JD32 116 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 ZNF729A6NN14 1252 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 SNRPGP15A8MWD9 76 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 HSD17B6O14756 317 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 TNFRSF13BO14836 293 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 TSC22D2O75157 780 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 FSTL3O95633 263 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 CTSDP07339 412 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 OMGP23515 440 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 GATA3P23771 443 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 CD34P28906 385 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 MEOX2P50222 304 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 RAB13P51153 203 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 UCP3P55916 312 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 PIGPP57054 158 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 KRTAP10-3P60369 221 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 MEF2CQ06413 473 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 CD69Q07108 199 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 EXOSC2Q13868 293 aaKnown RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 FCN2Q15485 313 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 MLANAQ16655 118 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 Q3ZCU0 254 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 TMEM155Q4W5P6 130 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 FAM209BQ5JX69 171 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 FAM53AQ6NSI3 398 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 DHRS11Q6UWP2 260 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 RBMS3Q6XE24 437 aaKnown RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 HSD17B13Q7Z5P4 300 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 LYG2Q86SG7 212 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 CCDC71LQ8N9Z2 235 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 UXS1Q8NBZ7 420 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 OR52L2PQ8NGH6 319 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 CASTOR1Q8WTX7 329 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 NEIL1Q96FI4 390 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 LINC00052Q96N35 136 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 ZNF436Q9C0F3 470 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 GAL3ST2Q9H3Q3 398 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 SAV1Q9H4B6 383 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 NCOR1P1Q9H4R4 102 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 RAB9BQ9NP90 201 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 BIN3Q9NQY0 253 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 SLC2A9Q9NRM0 540 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 SDHAF2Q9NX18 166 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 GNG12Q9UBI6 72 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 MIOXQ9UGB7 285 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 JPT1Q9UK76 154 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 GPR132Q9UNW8 380 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 UBE2J1Q9Y385 318 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 OR2W1Q9Y3N9 320 aa5.19□□□□□ -1.58
HDAC1-205ENST00000472928 RBM7Q9Y580 266 aaKnown RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 TET2Q6N021 2002 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-205ENST00000472928 STAB2Q8WWQ8 2551 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 TNCP24821 2201 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 TEX13DA0A0J9YY54 714 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-205ENST00000472928 KBTBD11-OT1A0A1B0GTJ5 212 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 C9orf170A2RU37 121 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 CRYM-AS1A6NIL9 109 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 F5H0A9 414 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-205ENST00000472928 M0QZ24 198 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 DNASE2O00115 360 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-205ENST00000472928 F2RL2O00254 374 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 GPR31O00270 319 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 GOSR2O14653 212 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 RGS11O94810 467 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 SFT2D2O95562 160 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 FGF2P09038 288 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 ANXA3P12429 323 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 CCL3L1P16619 93 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 GZMHP20718 246 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 ZBTB25P24278 435 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 NFYBP25208 207 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 CEACAM6P40199 344 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 LUMP51884 338 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-205ENST00000472928 GNB2P62879 340 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 HTD2P86397 168 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 C17orf58Q2M2W7 97 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 TMEM30BQ3MIR4 351 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 TMEM128Q5BJH2 165 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 WDR25Q64LD2 544 aaPredicted RBP5.18□□□□□ -1.58
HDAC1-205ENST00000472928 LIN54Q6MZP7 749 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 C11orf88Q6PI97 169 aa5.18□□□□□ -1.58
HDAC1-205ENST00000472928 ZNF818PQ6ZRF7 136 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms