RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RYR3Q15413 4870 aa11.76□□□□□ -0.53
VTI1A-203ENST00000472892 SORL1Q92673 2214 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 IGKV1D-8A0A087WSZ0 117 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 RRASP10301 218 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 GP9P14770 177 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 TALDO1P37837 337 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 GABARAPL2P60520 117 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 ARFRP1Q13795 201 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 ARL6IP1Q15041 203 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 UBE2UQ5VVX9 321 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 C22orf42Q6IC83 251 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 H1FOOQ8IZA3 346 aaPredicted RBP11.75□□□□□ -0.53
VTI1A-203ENST00000472892 BVESQ8NE79 360 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 OR6Q1Q8NGQ2 317 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 DDB2Q92466 427 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 RANGRFQ9HD47 186 aaPredicted RBP11.75□□□□□ -0.53
VTI1A-203ENST00000472892 ZNF355PQ9NSJ1 428 aa11.75□□□□□ -0.53
VTI1A-203ENST00000472892 A0A0G2JLM5 398 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 SHOXO15266 292 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 FGF9P31371 208 aaPredicted RBP11.74□□□□□ -0.53
VTI1A-203ENST00000472892 DUTP33316 252 aaKnown RBP11.74□□□□□ -0.53
VTI1A-203ENST00000472892 PITPNAQ00169 270 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 RTL8BQ17RB0 113 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 TEX45Q8NA69 505 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 ADTRPQ96IZ2 230 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 HARBI1Q96MB7 349 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 OR4C12Q96R67 309 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 GINS4Q9BRT9 223 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 ATG5Q9H1Y0 275 aa11.74□□□□□ -0.53
VTI1A-203ENST00000472892 ELF5Q9UKW6 265 aaPredicted RBP11.74□□□□□ -0.53
VTI1A-203ENST00000472892 RBM7Q9Y580 266 aaKnown RBP11.74□□□□□ -0.53
VTI1A-203ENST00000472892 C13orf42A0A1B0GVH6 325 aa11.73□□□□□ -0.53
VTI1A-203ENST00000472892 DTYMKP23919 212 aa11.73□□□□□ -0.53
VTI1A-203ENST00000472892 CBX3Q13185 183 aa11.73□□□□□ -0.53
VTI1A-203ENST00000472892 CDNFQ49AH0 187 aa11.73□□□□□ -0.53
VTI1A-203ENST00000472892 SPARTQ8N0X7 666 aa11.73□□□□□ -0.53
VTI1A-203ENST00000472892 ELOVL1Q9BW60 279 aa11.73□□□□□ -0.53
VTI1A-203ENST00000472892 TINAGL1Q9GZM7 467 aaPredicted RBP11.73□□□□□ -0.53
VTI1A-203ENST00000472892 LINC00473A8K010 186 aa11.72□□□□□ -0.53
VTI1A-203ENST00000472892 NOTOA8MTQ0 251 aa11.72□□□□□ -0.53
VTI1A-203ENST00000472892 ZP3P21754 424 aa11.72□□□□□ -0.53
VTI1A-203ENST00000472892 UBE2KP61086 200 aa11.72□□□□□ -0.53
VTI1A-203ENST00000472892 KLF5Q13887 457 aaPredicted RBP11.72□□□□□ -0.53
VTI1A-203ENST00000472892 HACD4Q5VWC8 232 aa11.72□□□□□ -0.53
VTI1A-203ENST00000472892 TPRA1Q86W33 373 aa11.72□□□□□ -0.53
VTI1A-203ENST00000472892 SBSPONQ8IVN8 264 aa11.72□□□□□ -0.53
VTI1A-203ENST00000472892 DCSTAMPQ9H295 470 aa11.72□□□□□ -0.53
VTI1A-203ENST00000472892 TXNL4BQ9NX01 149 aaKnown RBP11.72□□□□□ -0.53
VTI1A-203ENST00000472892 HUWE1Q7Z6Z7 4374 aaKnown RBP11.72□□□□□ -0.53
VTI1A-203ENST00000472892 SMIM30A4D0T7 59 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 MSGN1A6NI15 193 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 IGLV1-51P01701 117 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 CTXN2P0C2S0 81 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 AADACP22760 399 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 PRSS8Q16651 343 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 VMA21Q3ZAQ7 101 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 ZNF343Q6P1L6 599 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 OSR1Q8TAX0 266 aaPredicted RBP11.71□□□□□ -0.53
VTI1A-203ENST00000472892 USMG5Q96IX5 58 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 ST6GALNAC5Q9BVH7 336 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 STUB1Q9UNE7 303 aa11.71□□□□□ -0.53
VTI1A-203ENST00000472892 STAB2Q8WWQ8 2551 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 ANKRD34BA5PLL1 514 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 TRIM64CA6NLI5 447 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 CRYZL1O95825 349 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 HLA-DQB1P01920 261 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 FRMD6-AS1P0C7T7 363 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 IL34Q6ZMJ4 242 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 OVCH2Q7RTZ1 564 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 Q8N1Y9 231 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 ZNF645Q8N7E2 425 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 ADAD2Q8NCV1 583 aaKnown RBP11.7□□□□□ -0.54
VTI1A-203ENST00000472892 FCGR1BQ92637 280 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 YTHDF1Q9BYJ9 559 aaKnown RBP11.7□□□□□ -0.54
VTI1A-203ENST00000472892 PEF1Q9UBV8 284 aaKnown RBP11.7□□□□□ -0.54
VTI1A-203ENST00000472892 OR2W1Q9Y3N9 320 aa11.7□□□□□ -0.54
VTI1A-203ENST00000472892 C3orf84H3BNL1 204 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 RBMXL2O75526 392 aaKnown RBP11.69□□□□□ -0.54
VTI1A-203ENST00000472892 SCGNO76038 276 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 IGLV2-14P01704 120 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 PSMB9P28065 219 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 DYRK1AQ13627 763 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 CNIH2Q6PI25 160 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 IDO2Q6ZQW0 420 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 ANKRD13BQ86YJ7 626 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 PHB2Q99623 299 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 COA4Q9NYJ1 87 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 DAPK2Q9UIK4 370 aa11.69□□□□□ -0.54
VTI1A-203ENST00000472892 TMEM235A6NFC5 223 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 J3QRK9 145 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 SLC22A5O76082 557 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 ATP6V1G2O95670 118 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 OR9G9P0C7N8 305 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 APELAP0DMC3 54 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 NFYAP23511 347 aaPredicted RBP11.68□□□□□ -0.54
VTI1A-203ENST00000472892 TNXAQ16473 311 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 HAPLN4Q86UW8 402 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 OR9G4Q8NGQ1 327 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 NUDCD2Q8WVJ2 157 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 261.3 ms