RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 BEND2Q8NDZ0 799 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 DMBX1Q8NFW5 382 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-206ENST00000472815 RCL1Q9Y2P8 373 aaKnown RBP11.94□□□□□ -0.5
HIF3A-206ENST00000472815 U3KQ87 197 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 ARID1AO14497 2285 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 A8MXK9 166 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 C22orf46C9J442 243 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 TXNL1O43396 289 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 GPR137BO60478 399 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 RBMXL2O75526 392 aaKnown RBP11.94□□□□□ -0.5
HIF3A-206ENST00000472815 FOXH1O75593 365 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 RPL12P30050 165 aaKnown RBP11.94□□□□□ -0.5
HIF3A-206ENST00000472815 BRWD1-AS2P59051 145 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 UBA52P62987 128 aaKnown RBP11.94□□□□□ -0.5
HIF3A-206ENST00000472815 UTF1Q5T230 341 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 RAB40CQ96S21 281 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 PCGF1Q9BSM1 259 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 SLC25A31Q9H0C2 315 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 HEXA-AS1Q9H8Q6 139 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 SLC35D1Q9NTN3 355 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 CELSR2Q9HCU4 2923 aa11.93□□□□□ -0.5
HIF3A-206ENST00000472815 A0A0G2JRQ6 117 aa11.93□□□□□ -0.5
HIF3A-206ENST00000472815 PAX1P15863 534 aa11.93□□□□□ -0.5
HIF3A-206ENST00000472815 RAB13P51153 203 aa11.93□□□□□ -0.5
HIF3A-206ENST00000472815 RPL23AP62750 156 aaKnown RBP11.93□□□□□ -0.5
HIF3A-206ENST00000472815 EIF5AP63241 154 aaKnown RBP11.93□□□□□ -0.5
HIF3A-206ENST00000472815 TGIF2LXQ8IUE1 241 aa11.93□□□□□ -0.5
HIF3A-206ENST00000472815 KPTNQ9Y664 436 aa11.93□□□□□ -0.5
HIF3A-206ENST00000472815 SSSCA1O60232 199 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 LY86O95711 162 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 CRYZL1O95825 349 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 CT45A6P0DMU7 189 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 CT45A5P0DMU8 189 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 CT45A7P0DMV0 189 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 MC5RP33032 325 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 POLR2GP62487 172 aaKnown RBP eCLIP11.92□□□□□ -0.5
HIF3A-206ENST00000472815 HLA-DRB5Q30154 266 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 CXorf66Q5JRM2 361 aaPredicted RBP11.92□□□□□ -0.5
HIF3A-206ENST00000472815 ZNF383Q8NA42 475 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 CLDND2Q8NHS1 167 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 ZNF471Q9BX82 626 aaPredicted RBP11.92□□□□□ -0.5
HIF3A-206ENST00000472815 GSX2Q9BZM3 304 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 CENPEQ02224 2701 aa11.92□□□□□ -0.5
HIF3A-206ENST00000472815 SYNGR2O43760 224 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 P0C879 139 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 HKR1P10072 659 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 ARF6P62330 175 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 NDUFA5Q16718 116 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 OR2C3Q8N628 320 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 ZNF680Q8NEM1 530 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 OR4A16Q8NH70 328 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
HIF3A-206ENST00000472815 C10orf105Q8TEF2 133 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 UBQLN2Q9UHD9 624 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 AKAP6Q13023 2319 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 H7C2Y5 167 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 IGLV1-47P01700 117 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 PRTN3P24158 256 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 CEACAM3P40198 252 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 CAV2P51636 162 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 LINC00205P59089 165 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 ZNF787Q6DD87 383 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 Q6ZRM9 215 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 PDPNQ86YL7 162 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 ZNF295-AS1Q8N0V1 137 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 ST6GALNAC6Q969X2 333 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 MRPL20Q9BYC9 149 aaKnown RBP11.91□□□□□ -0.5
HIF3A-206ENST00000472815 MAGT1Q9H0U3 335 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 LYRM2Q9NU23 88 aaPredicted RBP11.91□□□□□ -0.5
HIF3A-206ENST00000472815 WSB1Q9Y6I7 421 aa11.91□□□□□ -0.5
HIF3A-206ENST00000472815 KIAA1324LA8MWY0 1029 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-206ENST00000472815 BUB1B-PAK6H3BSN5 160 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 CHST1O43916 411 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 GAPDHP04406 335 aaKnown RBP11.9□□□□□ -0.5
HIF3A-206ENST00000472815 TAS2R30P59541 319 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 LMO4P61968 165 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 BAXQ07812 192 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 POU2AF1Q16633 256 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 C1orf229Q6ZS94 237 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-206ENST00000472815 OR4C13Q8NGP0 309 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 PERPQ96FX8 193 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 RHOVQ96L33 236 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-206ENST00000472815 CLCC1Q96S66 551 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 UNKLQ9H9P5 680 aaKnown RBP11.9□□□□□ -0.5
HIF3A-206ENST00000472815 HSPB7Q9UBY9 170 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 ITGB1BP2Q9UKP3 347 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 WASHC3Q9Y3C0 194 aa11.9□□□□□ -0.5
HIF3A-206ENST00000472815 IGHV2-70DA0A0C4DH43 119 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 MSGN1A6NI15 193 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 H0YJW9 148 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 SHOXO15266 292 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
HIF3A-206ENST00000472815 COX7A1P24310 79 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 UBE2KP61086 200 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 RAB14P61106 215 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms