RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 PPBPP02775 128 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 OR10J1P30954 320 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 RPL28P46779 137 aaKnown RBP-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 SPINK7P58062 85 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 RAB14P61106 215 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 TBPL1P62380 186 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 GDF5OSQ5U4N7 250 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 Q6ZT83 130 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 MRPL52Q86TS9 123 aaKnown RBP-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 C17orf78Q8N4C9 275 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 Q8N814 137 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 TNFAIP8L1Q8WVP5 186 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 C12orf43Q96C57 262 aaKnown RBP-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 MS4A6EQ96DS6 147 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 SFRP2Q96HF1 295 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 TTTY13Q9BZ97 58 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 OR51B6Q9H340 312 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 RMND1Q9NWS8 449 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 LHFPL6Q9Y693 200 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 PCDH15Q96QU1 1955 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 CNTRLQ7Z7A1 2325 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 A0A087WUU8 490 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 GOLGA8RI6L899 631 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 GPR171O14626 319 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 SNAP29O95721 258 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 HBZP02008 142 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 DEFA4P12838 97 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 SRMP19623 302 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 MSNP26038 577 aaKnown RBP-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 AGTR1P30556 359 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 ZNF93P35789 620 aaPredicted RBP-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 CDK9P50750 372 aaKnown RBP-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 AQP5P55064 265 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 C1DQ13901 141 aaKnown RBP-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 DHFR2Q86XF0 187 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 BAP18Q8IXM2 172 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 LRRC34Q8IZ02 419 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 ZNF321PQ8N8H1 164 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 LRRC39Q96DD0 335 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 CATSPER2Q96P56 530 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 OR7D2Q96RA2 312 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 NMNAT3Q96T66 252 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 NABP2Q9BQ15 211 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 CD300AQ9UGN4 299 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 NAT8Q9UHE5 227 aa-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 DNMT1P26358 1616 aaKnown RBP-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 ZFC3H1O60293 1989 aaKnown RBP-0.28□□□□□ -2.45
COMMD3-209ENST00000471350 PHLPP2Q6ZVD8 1323 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 DSCAML1Q8TD84 2053 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 TRAV8-1A0A0A6YYK1 113 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 GSTTP1A0A1W2PQM5 241 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 C19orf84I3L1E1 186 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 COPEO14579 308 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 SNAI1O95863 264 aaPredicted RBP-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 PMP2P02689 132 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 CRYGCP07315 174 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 METTL15P1P0C7V9 234 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 HAAOP46952 286 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 DAD1P61803 113 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 HERVK_113P63121 156 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 TMEM267Q0VDI3 215 aaPredicted RBP-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 VAMP3Q15836 100 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 TMEM249Q2WGJ8 235 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 BSXQ3C1V8 233 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 ACSM3Q53FZ2 586 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 GRINAQ7Z429 371 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 LINC00471Q8N535 108 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 OR4A15Q8NGL6 344 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 LRRC45Q96CN5 670 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 UGT2B28Q9BY64 529 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 FBXO44Q9H4M3 255 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 IFT46Q9NQC8 304 aa-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 RBM7Q9Y580 266 aaKnown RBP-0.29□□□□□ -2.46
COMMD3-209ENST00000471350 REREQ9P2R6 1566 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 A0A1B0GW54 56 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 IRGMA1A4Y4 181 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 MRASO14807 208 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 LIN7AO14910 233 aaPredicted RBP-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 CASC3O15234 703 aaKnown RBP-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 KDELR3O43731 214 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 HYPMO75409 117 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 ARL6IP5O75915 188 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 MSMBP08118 114 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 BRS3P32247 399 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 UBE2IP63279 158 aaKnown RBP-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 EXOC3L4Q17RC7 722 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 SPINK9Q5DT21 86 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 FAM27BQ5VT28 67 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 SPINK6Q6UWN8 80 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 LCA10Q71F78 164 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 ATP5L2Q7Z4Y8 100 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 ACOT12Q8WYK0 555 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 BORCS5Q969J3 196 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 STMN3Q9NZ72 180 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 EMC3Q9P0I2 261 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 ALPK2Q86TB3 2170 aa-0.3□□□□□ -2.46
COMMD3-209ENST00000471350 HEATR5BQ9P2D3 2071 aa-0.31□□□□□ -2.46
COMMD3-209ENST00000471350 ZFYVE26Q68DK2 2539 aa-0.31□□□□□ -2.46
COMMD3-209ENST00000471350 TRBV10-2A0A0K0K1G8 114 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms