RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TOMM40LQ969M1 308 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 MRGPRFQ96AM1 343 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 AKR1E2Q96JD6 320 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 MARVELD1Q9BSK0 173 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 ABHD14AQ9BUJ0 271 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 CLEC7AQ9BXN2 247 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 SLC5A7Q9GZV3 580 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 PARP12Q9H0J9 701 aaKnown RBP7.21□□□□□ -1.26
SF3A1-206ENST00000471037 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 GHITMQ9H3K2 345 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 NUDT15Q9NV35 164 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 GPR132Q9UNW8 380 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 C14orf166Q9Y224 244 aaKnown RBP7.21□□□□□ -1.26
SF3A1-206ENST00000471037 HILPDAQ9Y5L2 63 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 WI2-2373I1.2A0A1W2PRP0 233 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 J3QR06 171 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 ARPC1BO15143 372 aaKnown RBP7.2□□□□□ -1.26
SF3A1-206ENST00000471037 RLN1P04808 185 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 CTSDP07339 412 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-206ENST00000471037 SPNP16150 400 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 S100GP29377 79 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 MECP2P51608 486 aaKnown RBP7.2□□□□□ -1.26
SF3A1-206ENST00000471037 PRRX1P54821 245 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 TAS2R31P59538 309 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 UBE2MP61081 183 aaKnown RBP7.2□□□□□ -1.26
SF3A1-206ENST00000471037 CT45A1Q5HYN5 189 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 FAM53AQ6NSI3 398 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-206ENST00000471037 CMTM1Q8IZ96 169 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 ABHD12Q8N2K0 398 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 CCDC71LQ8N9Z2 235 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-206ENST00000471037 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 OR4X2Q8NGF9 303 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 OR4P4Q8NGL7 312 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 CT45A3Q8NHU0 189 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 LEAP2Q969E1 77 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 WWC2-AS2Q96NR7 200 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 B9D2Q9BPU9 175 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 AGMATQ9BSE5 352 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 RSRP1Q9BUV0 290 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 GPR61Q9BZJ8 451 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 OR2D2Q9H210 308 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 IFI27L2Q9H2X8 130 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 PIPOXQ9P0Z9 390 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF221Q9UK13 617 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 PSG11Q9UQ72 335 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 GAB2Q9UQC2 676 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 VSIG4Q9Y279 399 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
SF3A1-206ENST00000471037 TRAV6A0A075B6T7 132 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 INMT-MINDY4F8WBC2 141 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 GPR31O00270 319 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 TOR1AO14656 332 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 RAB29O14966 203 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 SLC31A2O15432 143 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 ST8SIA5O15466 376 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 OR2F2O95006 317 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 IGLV1-47P01700 117 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 IL3RAP26951 378 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 HTR1DP28221 377 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 GNRHRP30968 328 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 GPR12P47775 334 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 GNG10P50151 68 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF134P52741 427 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 RND3P61587 244 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 ABCA11PQ4W5N1 156 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 DEFB121Q5J5C9 76 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 FAM71F2Q6NXP2 309 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 TMED4Q7Z7H5 227 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 CENPVQ7Z7K6 275 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-206ENST00000471037 LINC00482Q8N8I6 264 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 BVESQ8NE79 360 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 OR10X1Q8NGY0 326 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 ALX4Q9H161 411 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-206ENST00000471037 C5orf66Q9H5L9 145 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 CCL28Q9NRJ3 127 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 SLC2A9Q9NRM0 540 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 FLVCR2Q9UPI3 526 aa7.19□□□□□ -1.26
SF3A1-206ENST00000471037 AMMECR1Q9Y4X0 333 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-206ENST00000471037 HSD17B6O14756 317 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 PRAF2O60831 178 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 DHFRP00374 187 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 IGLV2-14P01704 120 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 IGHV3-7P01780 117 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 AMY1AP04745 511 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 PI3P19957 117 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 BRS3P32247 399 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 ARHGDIBP52566 201 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF137PP52743 207 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 PIGPP57054 158 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 CD69Q07108 199 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 HLA-DRB5Q30154 266 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 TMEM128Q5BJH2 165 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 UTF1Q5T230 341 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 ETV3LQ6ZN32 361 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF818PQ6ZRF7 136 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 SLC25A42Q86VD7 318 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 DRAM1Q8N682 238 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms